Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17983 | 54172;54173;54174 | chr2:178605230;178605229;178605228 | chr2:179469957;179469956;179469955 |
N2AB | 16342 | 49249;49250;49251 | chr2:178605230;178605229;178605228 | chr2:179469957;179469956;179469955 |
N2A | 15415 | 46468;46469;46470 | chr2:178605230;178605229;178605228 | chr2:179469957;179469956;179469955 |
N2B | 8918 | 26977;26978;26979 | chr2:178605230;178605229;178605228 | chr2:179469957;179469956;179469955 |
Novex-1 | 9043 | 27352;27353;27354 | chr2:178605230;178605229;178605228 | chr2:179469957;179469956;179469955 |
Novex-2 | 9110 | 27553;27554;27555 | chr2:178605230;178605229;178605228 | chr2:179469957;179469956;179469955 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | None | None | 0.4 | N | 0.319 | 0.14 | 0.177238962908 | gnomAD-4.0.0 | 6.85439E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.00403E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.0608 | likely_benign | 0.0589 | benign | -1.274 | Destabilizing | 0.4 | N | 0.319 | neutral | N | 0.418306234 | None | None | N |
P/C | 0.5154 | ambiguous | 0.475 | ambiguous | -0.67 | Destabilizing | 1.0 | D | 0.697 | prob.neutral | None | None | None | None | N |
P/D | 0.369 | ambiguous | 0.3125 | benign | -1.401 | Destabilizing | 0.996 | D | 0.53 | neutral | None | None | None | None | N |
P/E | 0.2722 | likely_benign | 0.2321 | benign | -1.447 | Destabilizing | 0.996 | D | 0.523 | neutral | None | None | None | None | N |
P/F | 0.4749 | ambiguous | 0.4328 | ambiguous | -1.106 | Destabilizing | 0.996 | D | 0.705 | prob.neutral | None | None | None | None | N |
P/G | 0.2831 | likely_benign | 0.2483 | benign | -1.536 | Destabilizing | 0.985 | D | 0.54 | neutral | None | None | None | None | N |
P/H | 0.2423 | likely_benign | 0.2054 | benign | -1.165 | Destabilizing | 1.0 | D | 0.666 | neutral | N | 0.503039629 | None | None | N |
P/I | 0.2632 | likely_benign | 0.2599 | benign | -0.669 | Destabilizing | 0.991 | D | 0.617 | neutral | None | None | None | None | N |
P/K | 0.2842 | likely_benign | 0.2373 | benign | -1.226 | Destabilizing | 0.996 | D | 0.502 | neutral | None | None | None | None | N |
P/L | 0.1312 | likely_benign | 0.1182 | benign | -0.669 | Destabilizing | 0.135 | N | 0.415 | neutral | N | 0.486262022 | None | None | N |
P/M | 0.2573 | likely_benign | 0.2366 | benign | -0.389 | Destabilizing | 0.999 | D | 0.672 | neutral | None | None | None | None | N |
P/N | 0.2789 | likely_benign | 0.2357 | benign | -0.879 | Destabilizing | 0.996 | D | 0.667 | neutral | None | None | None | None | N |
P/Q | 0.1873 | likely_benign | 0.1574 | benign | -1.11 | Destabilizing | 0.998 | D | 0.601 | neutral | None | None | None | None | N |
P/R | 0.2173 | likely_benign | 0.1829 | benign | -0.611 | Destabilizing | 0.997 | D | 0.673 | neutral | N | 0.456651191 | None | None | N |
P/S | 0.1226 | likely_benign | 0.1083 | benign | -1.253 | Destabilizing | 0.817 | D | 0.295 | neutral | N | 0.426480213 | None | None | N |
P/T | 0.0992 | likely_benign | 0.0891 | benign | -1.207 | Destabilizing | 0.961 | D | 0.493 | neutral | N | 0.426653571 | None | None | N |
P/V | 0.1734 | likely_benign | 0.1699 | benign | -0.837 | Destabilizing | 0.971 | D | 0.545 | neutral | None | None | None | None | N |
P/W | 0.7225 | likely_pathogenic | 0.6499 | pathogenic | -1.292 | Destabilizing | 1.0 | D | 0.733 | prob.delet. | None | None | None | None | N |
P/Y | 0.4674 | ambiguous | 0.4158 | ambiguous | -1.034 | Destabilizing | 0.999 | D | 0.702 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.