Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17985 | 54178;54179;54180 | chr2:178605224;178605223;178605222 | chr2:179469951;179469950;179469949 |
N2AB | 16344 | 49255;49256;49257 | chr2:178605224;178605223;178605222 | chr2:179469951;179469950;179469949 |
N2A | 15417 | 46474;46475;46476 | chr2:178605224;178605223;178605222 | chr2:179469951;179469950;179469949 |
N2B | 8920 | 26983;26984;26985 | chr2:178605224;178605223;178605222 | chr2:179469951;179469950;179469949 |
Novex-1 | 9045 | 27358;27359;27360 | chr2:178605224;178605223;178605222 | chr2:179469951;179469950;179469949 |
Novex-2 | 9112 | 27559;27560;27561 | chr2:178605224;178605223;178605222 | chr2:179469951;179469950;179469949 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/Q | rs374042312 | None | 0.006 | N | 0.235 | 0.032 | 0.124217242631 | gnomAD-2.1.1 | 3.19E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 6.49E-05 | 0 |
H/Q | rs374042312 | None | 0.006 | N | 0.235 | 0.032 | 0.124217242631 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
H/Q | rs374042312 | None | 0.006 | N | 0.235 | 0.032 | 0.124217242631 | gnomAD-4.0.0 | 3.85367E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 7.1948E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.1366 | likely_benign | 0.1425 | benign | -0.052 | Destabilizing | 0.002 | N | 0.34 | neutral | None | None | None | None | N |
H/C | 0.1158 | likely_benign | 0.1124 | benign | 0.565 | Stabilizing | 0.245 | N | 0.455 | neutral | None | None | None | None | N |
H/D | 0.1499 | likely_benign | 0.1437 | benign | -0.337 | Destabilizing | 0.001 | N | 0.251 | neutral | N | 0.405491652 | None | None | N |
H/E | 0.1881 | likely_benign | 0.1813 | benign | -0.265 | Destabilizing | None | N | 0.155 | neutral | None | None | None | None | N |
H/F | 0.2026 | likely_benign | 0.1973 | benign | 1.022 | Stabilizing | 0.085 | N | 0.487 | neutral | None | None | None | None | N |
H/G | 0.2378 | likely_benign | 0.2273 | benign | -0.401 | Destabilizing | 0.002 | N | 0.33 | neutral | None | None | None | None | N |
H/I | 0.1313 | likely_benign | 0.1372 | benign | 0.886 | Stabilizing | 0.018 | N | 0.482 | neutral | None | None | None | None | N |
H/K | 0.124 | likely_benign | 0.1265 | benign | -0.109 | Destabilizing | 0.002 | N | 0.317 | neutral | None | None | None | None | N |
H/L | 0.0971 | likely_benign | 0.0912 | benign | 0.886 | Stabilizing | 0.006 | N | 0.359 | neutral | N | 0.404912862 | None | None | N |
H/M | 0.227 | likely_benign | 0.2385 | benign | 0.61 | Stabilizing | 0.497 | N | 0.491 | neutral | None | None | None | None | N |
H/N | 0.0552 | likely_benign | 0.0551 | benign | -0.188 | Destabilizing | None | N | 0.153 | neutral | N | 0.411436189 | None | None | N |
H/P | 0.4743 | ambiguous | 0.4227 | ambiguous | 0.598 | Stabilizing | 0.014 | N | 0.397 | neutral | N | 0.480277412 | None | None | N |
H/Q | 0.0996 | likely_benign | 0.0996 | benign | 0.027 | Stabilizing | 0.006 | N | 0.235 | neutral | N | 0.400296476 | None | None | N |
H/R | 0.0803 | likely_benign | 0.0751 | benign | -0.839 | Destabilizing | 0.006 | N | 0.225 | neutral | N | 0.379054412 | None | None | N |
H/S | 0.1072 | likely_benign | 0.1111 | benign | -0.042 | Destabilizing | None | N | 0.207 | neutral | None | None | None | None | N |
H/T | 0.1025 | likely_benign | 0.1053 | benign | 0.136 | Stabilizing | 0.002 | N | 0.368 | neutral | None | None | None | None | N |
H/V | 0.1091 | likely_benign | 0.1147 | benign | 0.598 | Stabilizing | 0.018 | N | 0.369 | neutral | None | None | None | None | N |
H/W | 0.3862 | ambiguous | 0.3634 | ambiguous | 1.153 | Stabilizing | 0.497 | N | 0.459 | neutral | None | None | None | None | N |
H/Y | 0.0959 | likely_benign | 0.0916 | benign | 1.304 | Stabilizing | 0.028 | N | 0.393 | neutral | N | 0.446087481 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.