Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17987 | 54184;54185;54186 | chr2:178605218;178605217;178605216 | chr2:179469945;179469944;179469943 |
N2AB | 16346 | 49261;49262;49263 | chr2:178605218;178605217;178605216 | chr2:179469945;179469944;179469943 |
N2A | 15419 | 46480;46481;46482 | chr2:178605218;178605217;178605216 | chr2:179469945;179469944;179469943 |
N2B | 8922 | 26989;26990;26991 | chr2:178605218;178605217;178605216 | chr2:179469945;179469944;179469943 |
Novex-1 | 9047 | 27364;27365;27366 | chr2:178605218;178605217;178605216 | chr2:179469945;179469944;179469943 |
Novex-2 | 9114 | 27565;27566;27567 | chr2:178605218;178605217;178605216 | chr2:179469945;179469944;179469943 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/T | rs1315555738 | -0.78 | 1.0 | N | 0.745 | 0.418 | 0.619976913611 | gnomAD-2.1.1 | 4.07E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 9.01E-06 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.1591 | likely_benign | 0.1179 | benign | -1.306 | Destabilizing | 1.0 | D | 0.705 | prob.neutral | N | 0.511873408 | None | None | N |
P/C | 0.7598 | likely_pathogenic | 0.6899 | pathogenic | -0.843 | Destabilizing | 1.0 | D | 0.769 | deleterious | None | None | None | None | N |
P/D | 0.7297 | likely_pathogenic | 0.67 | pathogenic | -1.037 | Destabilizing | 1.0 | D | 0.739 | prob.delet. | None | None | None | None | N |
P/E | 0.5614 | ambiguous | 0.46 | ambiguous | -1.052 | Destabilizing | 1.0 | D | 0.746 | deleterious | None | None | None | None | N |
P/F | 0.7135 | likely_pathogenic | 0.6241 | pathogenic | -1.021 | Destabilizing | 1.0 | D | 0.775 | deleterious | None | None | None | None | N |
P/G | 0.5558 | ambiguous | 0.4754 | ambiguous | -1.605 | Destabilizing | 1.0 | D | 0.732 | prob.delet. | None | None | None | None | N |
P/H | 0.5066 | ambiguous | 0.4057 | ambiguous | -1.132 | Destabilizing | 1.0 | D | 0.741 | deleterious | N | 0.505814228 | None | None | N |
P/I | 0.4825 | ambiguous | 0.3845 | ambiguous | -0.598 | Destabilizing | 1.0 | D | 0.793 | deleterious | None | None | None | None | N |
P/K | 0.6145 | likely_pathogenic | 0.4958 | ambiguous | -1.118 | Destabilizing | 1.0 | D | 0.745 | deleterious | None | None | None | None | N |
P/L | 0.2516 | likely_benign | 0.1854 | benign | -0.598 | Destabilizing | 1.0 | D | 0.769 | deleterious | N | 0.512566842 | None | None | N |
P/M | 0.528 | ambiguous | 0.4221 | ambiguous | -0.469 | Destabilizing | 1.0 | D | 0.741 | deleterious | None | None | None | None | N |
P/N | 0.6761 | likely_pathogenic | 0.5802 | pathogenic | -0.871 | Destabilizing | 1.0 | D | 0.762 | deleterious | None | None | None | None | N |
P/Q | 0.44 | ambiguous | 0.3294 | benign | -1.044 | Destabilizing | 1.0 | D | 0.771 | deleterious | None | None | None | None | N |
P/R | 0.4786 | ambiguous | 0.3698 | ambiguous | -0.589 | Destabilizing | 1.0 | D | 0.763 | deleterious | N | 0.492922288 | None | None | N |
P/S | 0.322 | likely_benign | 0.236 | benign | -1.369 | Destabilizing | 1.0 | D | 0.752 | deleterious | N | 0.488015114 | None | None | N |
P/T | 0.2458 | likely_benign | 0.1757 | benign | -1.273 | Destabilizing | 1.0 | D | 0.745 | deleterious | N | 0.475912608 | None | None | N |
P/V | 0.3387 | likely_benign | 0.2618 | benign | -0.798 | Destabilizing | 1.0 | D | 0.719 | prob.delet. | None | None | None | None | N |
P/W | 0.8772 | likely_pathogenic | 0.8323 | pathogenic | -1.196 | Destabilizing | 1.0 | D | 0.752 | deleterious | None | None | None | None | N |
P/Y | 0.7247 | likely_pathogenic | 0.65 | pathogenic | -0.907 | Destabilizing | 1.0 | D | 0.787 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.