Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17990 | 54193;54194;54195 | chr2:178605209;178605208;178605207 | chr2:179469936;179469935;179469934 |
N2AB | 16349 | 49270;49271;49272 | chr2:178605209;178605208;178605207 | chr2:179469936;179469935;179469934 |
N2A | 15422 | 46489;46490;46491 | chr2:178605209;178605208;178605207 | chr2:179469936;179469935;179469934 |
N2B | 8925 | 26998;26999;27000 | chr2:178605209;178605208;178605207 | chr2:179469936;179469935;179469934 |
Novex-1 | 9050 | 27373;27374;27375 | chr2:178605209;178605208;178605207 | chr2:179469936;179469935;179469934 |
Novex-2 | 9117 | 27574;27575;27576 | chr2:178605209;178605208;178605207 | chr2:179469936;179469935;179469934 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | None | None | 0.977 | N | 0.609 | 0.647 | 0.723663604452 | gnomAD-4.0.0 | 3.60103E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.93757E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.8911 | likely_pathogenic | 0.9136 | pathogenic | -1.205 | Destabilizing | 0.977 | D | 0.609 | neutral | N | 0.489509129 | None | None | N |
V/C | 0.9477 | likely_pathogenic | 0.9578 | pathogenic | -0.679 | Destabilizing | 1.0 | D | 0.839 | deleterious | None | None | None | None | N |
V/D | 0.9985 | likely_pathogenic | 0.9988 | pathogenic | -1.271 | Destabilizing | 0.999 | D | 0.867 | deleterious | None | None | None | None | N |
V/E | 0.9957 | likely_pathogenic | 0.9963 | pathogenic | -1.341 | Destabilizing | 0.999 | D | 0.857 | deleterious | D | 0.605267103 | None | None | N |
V/F | 0.7367 | likely_pathogenic | 0.7677 | pathogenic | -1.183 | Destabilizing | 0.995 | D | 0.846 | deleterious | None | None | None | None | N |
V/G | 0.9675 | likely_pathogenic | 0.9761 | pathogenic | -1.448 | Destabilizing | 0.999 | D | 0.862 | deleterious | D | 0.567888594 | None | None | N |
V/H | 0.9978 | likely_pathogenic | 0.9983 | pathogenic | -1.101 | Destabilizing | 1.0 | D | 0.873 | deleterious | None | None | None | None | N |
V/I | 0.0842 | likely_benign | 0.084 | benign | -0.663 | Destabilizing | 0.15 | N | 0.237 | neutral | None | None | None | None | N |
V/K | 0.9967 | likely_pathogenic | 0.9976 | pathogenic | -1.07 | Destabilizing | 0.998 | D | 0.859 | deleterious | None | None | None | None | N |
V/L | 0.6626 | likely_pathogenic | 0.6933 | pathogenic | -0.663 | Destabilizing | 0.898 | D | 0.621 | neutral | D | 0.53635528 | None | None | N |
V/M | 0.6349 | likely_pathogenic | 0.6544 | pathogenic | -0.385 | Destabilizing | 0.993 | D | 0.801 | deleterious | D | 0.604863494 | None | None | N |
V/N | 0.9944 | likely_pathogenic | 0.995 | pathogenic | -0.686 | Destabilizing | 0.999 | D | 0.897 | deleterious | None | None | None | None | N |
V/P | 0.998 | likely_pathogenic | 0.9985 | pathogenic | -0.809 | Destabilizing | 0.999 | D | 0.865 | deleterious | None | None | None | None | N |
V/Q | 0.995 | likely_pathogenic | 0.9959 | pathogenic | -0.951 | Destabilizing | 0.999 | D | 0.888 | deleterious | None | None | None | None | N |
V/R | 0.994 | likely_pathogenic | 0.9957 | pathogenic | -0.476 | Destabilizing | 0.999 | D | 0.89 | deleterious | None | None | None | None | N |
V/S | 0.9769 | likely_pathogenic | 0.9779 | pathogenic | -1.06 | Destabilizing | 0.998 | D | 0.851 | deleterious | None | None | None | None | N |
V/T | 0.9192 | likely_pathogenic | 0.9221 | pathogenic | -1.035 | Destabilizing | 0.983 | D | 0.69 | prob.neutral | None | None | None | None | N |
V/W | 0.9966 | likely_pathogenic | 0.9974 | pathogenic | -1.321 | Destabilizing | 1.0 | D | 0.861 | deleterious | None | None | None | None | N |
V/Y | 0.978 | likely_pathogenic | 0.9823 | pathogenic | -1.053 | Destabilizing | 0.999 | D | 0.847 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.