Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17991 | 54196;54197;54198 | chr2:178605206;178605205;178605204 | chr2:179469933;179469932;179469931 |
N2AB | 16350 | 49273;49274;49275 | chr2:178605206;178605205;178605204 | chr2:179469933;179469932;179469931 |
N2A | 15423 | 46492;46493;46494 | chr2:178605206;178605205;178605204 | chr2:179469933;179469932;179469931 |
N2B | 8926 | 27001;27002;27003 | chr2:178605206;178605205;178605204 | chr2:179469933;179469932;179469931 |
Novex-1 | 9051 | 27376;27377;27378 | chr2:178605206;178605205;178605204 | chr2:179469933;179469932;179469931 |
Novex-2 | 9118 | 27577;27578;27579 | chr2:178605206;178605205;178605204 | chr2:179469933;179469932;179469931 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | None | None | 0.978 | N | 0.579 | 0.346 | 0.430239905395 | gnomAD-4.0.0 | 2.73955E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 2.5364E-05 | None | 0 | 0 | 9.00004E-07 | 2.32105E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.107 | likely_benign | 0.1042 | benign | -0.318 | Destabilizing | 0.994 | D | 0.379 | neutral | N | 0.486671107 | None | None | I |
T/C | 0.4415 | ambiguous | 0.4575 | ambiguous | -0.283 | Destabilizing | 1.0 | D | 0.64 | neutral | None | None | None | None | I |
T/D | 0.5805 | likely_pathogenic | 0.5754 | pathogenic | 0.032 | Stabilizing | 1.0 | D | 0.672 | neutral | None | None | None | None | I |
T/E | 0.4124 | ambiguous | 0.4286 | ambiguous | -0.048 | Destabilizing | 1.0 | D | 0.658 | neutral | None | None | None | None | I |
T/F | 0.2823 | likely_benign | 0.2536 | benign | -0.825 | Destabilizing | 0.998 | D | 0.663 | neutral | None | None | None | None | I |
T/G | 0.3223 | likely_benign | 0.3168 | benign | -0.441 | Destabilizing | 1.0 | D | 0.592 | neutral | None | None | None | None | I |
T/H | 0.3025 | likely_benign | 0.3001 | benign | -0.714 | Destabilizing | 1.0 | D | 0.654 | neutral | None | None | None | None | I |
T/I | 0.1958 | likely_benign | 0.1794 | benign | -0.118 | Destabilizing | 0.978 | D | 0.579 | neutral | N | 0.493117076 | None | None | I |
T/K | 0.2789 | likely_benign | 0.2949 | benign | -0.371 | Destabilizing | 0.999 | D | 0.619 | neutral | N | 0.454905405 | None | None | I |
T/L | 0.1181 | likely_benign | 0.1105 | benign | -0.118 | Destabilizing | 0.134 | N | 0.256 | neutral | None | None | None | None | I |
T/M | 0.0992 | likely_benign | 0.0915 | benign | 0.032 | Stabilizing | 0.998 | D | 0.66 | neutral | None | None | None | None | I |
T/N | 0.1852 | likely_benign | 0.164 | benign | -0.153 | Destabilizing | 1.0 | D | 0.577 | neutral | None | None | None | None | I |
T/P | 0.7999 | likely_pathogenic | 0.7887 | pathogenic | -0.156 | Destabilizing | 0.999 | D | 0.665 | neutral | N | 0.513422278 | None | None | I |
T/Q | 0.2683 | likely_benign | 0.2797 | benign | -0.402 | Destabilizing | 1.0 | D | 0.66 | neutral | None | None | None | None | I |
T/R | 0.2534 | likely_benign | 0.2653 | benign | -0.064 | Destabilizing | 0.999 | D | 0.664 | neutral | N | 0.480379852 | None | None | I |
T/S | 0.1294 | likely_benign | 0.1164 | benign | -0.344 | Destabilizing | 0.998 | D | 0.398 | neutral | N | 0.455558766 | None | None | I |
T/V | 0.1499 | likely_benign | 0.1413 | benign | -0.156 | Destabilizing | 0.983 | D | 0.363 | neutral | None | None | None | None | I |
T/W | 0.6551 | likely_pathogenic | 0.6466 | pathogenic | -0.833 | Destabilizing | 1.0 | D | 0.677 | prob.neutral | None | None | None | None | I |
T/Y | 0.3653 | ambiguous | 0.3521 | ambiguous | -0.546 | Destabilizing | 1.0 | D | 0.674 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.