Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18001 | 54226;54227;54228 | chr2:178605176;178605175;178605174 | chr2:179469903;179469902;179469901 |
N2AB | 16360 | 49303;49304;49305 | chr2:178605176;178605175;178605174 | chr2:179469903;179469902;179469901 |
N2A | 15433 | 46522;46523;46524 | chr2:178605176;178605175;178605174 | chr2:179469903;179469902;179469901 |
N2B | 8936 | 27031;27032;27033 | chr2:178605176;178605175;178605174 | chr2:179469903;179469902;179469901 |
Novex-1 | 9061 | 27406;27407;27408 | chr2:178605176;178605175;178605174 | chr2:179469903;179469902;179469901 |
Novex-2 | 9128 | 27607;27608;27609 | chr2:178605176;178605175;178605174 | chr2:179469903;179469902;179469901 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/T | None | None | 0.062 | N | 0.521 | 0.044 | 0.110078149338 | gnomAD-4.0.0 | 1.59413E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86266E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0928 | likely_benign | 0.0884 | benign | -0.957 | Destabilizing | None | N | 0.215 | neutral | N | 0.490878408 | None | None | N |
S/C | 0.123 | likely_benign | 0.1188 | benign | -0.749 | Destabilizing | 0.78 | D | 0.529 | neutral | N | 0.471238702 | None | None | N |
S/D | 0.6681 | likely_pathogenic | 0.675 | pathogenic | -1.017 | Destabilizing | 0.001 | N | 0.329 | neutral | None | None | None | None | N |
S/E | 0.5715 | likely_pathogenic | 0.5496 | ambiguous | -0.892 | Destabilizing | 0.081 | N | 0.51 | neutral | None | None | None | None | N |
S/F | 0.2485 | likely_benign | 0.2331 | benign | -1.097 | Destabilizing | 0.317 | N | 0.618 | neutral | N | 0.425536063 | None | None | N |
S/G | 0.1406 | likely_benign | 0.1458 | benign | -1.284 | Destabilizing | 0.035 | N | 0.509 | neutral | None | None | None | None | N |
S/H | 0.352 | ambiguous | 0.3377 | benign | -1.711 | Destabilizing | 0.555 | D | 0.537 | neutral | None | None | None | None | N |
S/I | 0.226 | likely_benign | 0.1828 | benign | -0.153 | Destabilizing | 0.235 | N | 0.59 | neutral | None | None | None | None | N |
S/K | 0.5635 | ambiguous | 0.5697 | pathogenic | -0.278 | Destabilizing | 0.149 | N | 0.497 | neutral | None | None | None | None | N |
S/L | 0.096 | likely_benign | 0.091 | benign | -0.153 | Destabilizing | 0.001 | N | 0.416 | neutral | None | None | None | None | N |
S/M | 0.1511 | likely_benign | 0.1495 | benign | -0.064 | Destabilizing | 0.38 | N | 0.538 | neutral | None | None | None | None | N |
S/N | 0.2132 | likely_benign | 0.207 | benign | -0.742 | Destabilizing | 0.001 | N | 0.341 | neutral | None | None | None | None | N |
S/P | 0.9889 | likely_pathogenic | 0.9893 | pathogenic | -0.388 | Destabilizing | 0.317 | N | 0.562 | neutral | N | 0.470985212 | None | None | N |
S/Q | 0.4001 | ambiguous | 0.3901 | ambiguous | -0.7 | Destabilizing | 0.555 | D | 0.559 | neutral | None | None | None | None | N |
S/R | 0.5324 | ambiguous | 0.5137 | ambiguous | -0.492 | Destabilizing | 0.38 | N | 0.557 | neutral | None | None | None | None | N |
S/T | 0.0791 | likely_benign | 0.0846 | benign | -0.57 | Destabilizing | 0.062 | N | 0.521 | neutral | N | 0.409838679 | None | None | N |
S/V | 0.2106 | likely_benign | 0.1822 | benign | -0.388 | Destabilizing | 0.081 | N | 0.545 | neutral | None | None | None | None | N |
S/W | 0.4187 | ambiguous | 0.4054 | ambiguous | -1.187 | Destabilizing | 0.935 | D | 0.654 | neutral | None | None | None | None | N |
S/Y | 0.2407 | likely_benign | 0.221 | benign | -0.794 | Destabilizing | 0.484 | N | 0.605 | neutral | N | 0.421669039 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.