Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18011 | 54256;54257;54258 | chr2:178605146;178605145;178605144 | chr2:179469873;179469872;179469871 |
N2AB | 16370 | 49333;49334;49335 | chr2:178605146;178605145;178605144 | chr2:179469873;179469872;179469871 |
N2A | 15443 | 46552;46553;46554 | chr2:178605146;178605145;178605144 | chr2:179469873;179469872;179469871 |
N2B | 8946 | 27061;27062;27063 | chr2:178605146;178605145;178605144 | chr2:179469873;179469872;179469871 |
Novex-1 | 9071 | 27436;27437;27438 | chr2:178605146;178605145;178605144 | chr2:179469873;179469872;179469871 |
Novex-2 | 9138 | 27637;27638;27639 | chr2:178605146;178605145;178605144 | chr2:179469873;179469872;179469871 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | rs766446275 | -0.145 | 0.76 | N | 0.409 | 0.071 | 0.225215365344 | gnomAD-2.1.1 | 8.09E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.79E-05 | 0 |
T/A | rs766446275 | -0.145 | 0.76 | N | 0.409 | 0.071 | 0.225215365344 | gnomAD-4.0.0 | 1.23236E-05 | None | None | None | None | N | None | 0 | 2.23874E-05 | None | 0 | 0 | None | 0 | 0 | 1.52976E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0865 | likely_benign | 0.084 | benign | -0.257 | Destabilizing | 0.76 | D | 0.409 | neutral | N | 0.485125872 | None | None | N |
T/C | 0.3836 | ambiguous | 0.3939 | ambiguous | -0.241 | Destabilizing | 0.999 | D | 0.451 | neutral | None | None | None | None | N |
T/D | 0.2018 | likely_benign | 0.2104 | benign | 0.058 | Stabilizing | 0.986 | D | 0.417 | neutral | None | None | None | None | N |
T/E | 0.279 | likely_benign | 0.2829 | benign | -0.017 | Destabilizing | 0.986 | D | 0.402 | neutral | None | None | None | None | N |
T/F | 0.3903 | ambiguous | 0.3884 | ambiguous | -0.732 | Destabilizing | 0.993 | D | 0.594 | neutral | None | None | None | None | N |
T/G | 0.1191 | likely_benign | 0.118 | benign | -0.39 | Destabilizing | 0.91 | D | 0.487 | neutral | None | None | None | None | N |
T/H | 0.2841 | likely_benign | 0.3004 | benign | -0.664 | Destabilizing | 0.999 | D | 0.571 | neutral | None | None | None | None | N |
T/I | 0.2939 | likely_benign | 0.3069 | benign | -0.028 | Destabilizing | 0.885 | D | 0.395 | neutral | N | 0.461465786 | None | None | N |
T/K | 0.1941 | likely_benign | 0.2086 | benign | -0.406 | Destabilizing | 0.986 | D | 0.407 | neutral | None | None | None | None | N |
T/L | 0.1457 | likely_benign | 0.1479 | benign | -0.028 | Destabilizing | 0.91 | D | 0.381 | neutral | None | None | None | None | N |
T/M | 0.1537 | likely_benign | 0.1502 | benign | 0.05 | Stabilizing | 0.998 | D | 0.426 | neutral | None | None | None | None | N |
T/N | 0.0902 | likely_benign | 0.0907 | benign | -0.177 | Destabilizing | 0.982 | D | 0.403 | neutral | N | 0.454456248 | None | None | N |
T/P | 0.2395 | likely_benign | 0.2476 | benign | -0.075 | Destabilizing | 0.991 | D | 0.43 | neutral | N | 0.492918635 | None | None | N |
T/Q | 0.2495 | likely_benign | 0.2526 | benign | -0.391 | Destabilizing | 0.993 | D | 0.413 | neutral | None | None | None | None | N |
T/R | 0.2097 | likely_benign | 0.2153 | benign | -0.12 | Destabilizing | 0.986 | D | 0.42 | neutral | None | None | None | None | N |
T/S | 0.0741 | likely_benign | 0.0702 | benign | -0.351 | Destabilizing | 0.17 | N | 0.291 | neutral | N | 0.431576601 | None | None | N |
T/V | 0.1934 | likely_benign | 0.1998 | benign | -0.075 | Destabilizing | 0.214 | N | 0.289 | neutral | None | None | None | None | N |
T/W | 0.6686 | likely_pathogenic | 0.674 | pathogenic | -0.775 | Destabilizing | 0.999 | D | 0.622 | neutral | None | None | None | None | N |
T/Y | 0.3952 | ambiguous | 0.406 | ambiguous | -0.485 | Destabilizing | 0.998 | D | 0.584 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.