Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18018 | 54277;54278;54279 | chr2:178605125;178605124;178605123 | chr2:179469852;179469851;179469850 |
N2AB | 16377 | 49354;49355;49356 | chr2:178605125;178605124;178605123 | chr2:179469852;179469851;179469850 |
N2A | 15450 | 46573;46574;46575 | chr2:178605125;178605124;178605123 | chr2:179469852;179469851;179469850 |
N2B | 8953 | 27082;27083;27084 | chr2:178605125;178605124;178605123 | chr2:179469852;179469851;179469850 |
Novex-1 | 9078 | 27457;27458;27459 | chr2:178605125;178605124;178605123 | chr2:179469852;179469851;179469850 |
Novex-2 | 9145 | 27658;27659;27660 | chr2:178605125;178605124;178605123 | chr2:179469852;179469851;179469850 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | rs2054476187 | None | 0.117 | N | 0.421 | 0.242 | 0.269111216191 | gnomAD-4.0.0 | 1.27475E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.22692E-04 | None | 0 | 0 | 0 | 0 | 0 |
K/M | rs368425364 | 0.319 | 0.484 | N | 0.524 | 0.192 | None | gnomAD-2.1.1 | 8.61E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 1.19971E-04 | 1.49576E-04 | 2.81928E-04 |
K/M | rs368425364 | 0.319 | 0.484 | N | 0.524 | 0.192 | None | gnomAD-3.1.2 | 7.9E-05 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 9.41E-05 | 0 | 1.47184E-04 | 0 | 0 |
K/M | rs368425364 | 0.319 | 0.484 | N | 0.524 | 0.192 | None | gnomAD-4.0.0 | 8.92918E-05 | None | None | None | None | N | None | 1.33643E-05 | 0 | None | 0 | 0 | None | 1.40616E-04 | 0 | 1.06849E-04 | 0 | 1.28189E-04 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.2459 | likely_benign | 0.2853 | benign | -0.104 | Destabilizing | 0.035 | N | 0.451 | neutral | None | None | None | None | N |
K/C | 0.625 | likely_pathogenic | 0.663 | pathogenic | -0.249 | Destabilizing | 0.824 | D | 0.572 | neutral | None | None | None | None | N |
K/D | 0.5769 | likely_pathogenic | 0.6303 | pathogenic | 0.196 | Stabilizing | 0.149 | N | 0.462 | neutral | None | None | None | None | N |
K/E | 0.1424 | likely_benign | 0.1591 | benign | 0.25 | Stabilizing | 0.117 | N | 0.421 | neutral | N | 0.420350114 | None | None | N |
K/F | 0.7343 | likely_pathogenic | 0.7803 | pathogenic | -0.079 | Destabilizing | 0.555 | D | 0.587 | neutral | None | None | None | None | N |
K/G | 0.3939 | ambiguous | 0.4457 | ambiguous | -0.386 | Destabilizing | 0.149 | N | 0.523 | neutral | None | None | None | None | N |
K/H | 0.2798 | likely_benign | 0.3051 | benign | -0.723 | Destabilizing | 0.791 | D | 0.523 | neutral | None | None | None | None | N |
K/I | 0.3226 | likely_benign | 0.3687 | ambiguous | 0.578 | Stabilizing | 0.235 | N | 0.569 | neutral | None | None | None | None | N |
K/L | 0.3159 | likely_benign | 0.3608 | ambiguous | 0.578 | Stabilizing | 0.081 | N | 0.523 | neutral | None | None | None | None | N |
K/M | 0.2102 | likely_benign | 0.2381 | benign | 0.317 | Stabilizing | 0.484 | N | 0.524 | neutral | N | 0.50379543 | None | None | N |
K/N | 0.4011 | ambiguous | 0.4409 | ambiguous | 0.076 | Stabilizing | 0.117 | N | 0.461 | neutral | N | 0.391702075 | None | None | N |
K/P | 0.7899 | likely_pathogenic | 0.8012 | pathogenic | 0.382 | Stabilizing | 0.555 | D | 0.524 | neutral | None | None | None | None | N |
K/Q | 0.1192 | likely_benign | 0.1248 | benign | -0.029 | Destabilizing | 0.484 | N | 0.543 | neutral | N | 0.44393905 | None | None | N |
K/R | 0.0835 | likely_benign | 0.0858 | benign | -0.205 | Destabilizing | 0.117 | N | 0.461 | neutral | N | 0.444112408 | None | None | N |
K/S | 0.2927 | likely_benign | 0.3314 | benign | -0.479 | Destabilizing | 0.007 | N | 0.231 | neutral | None | None | None | None | N |
K/T | 0.0989 | likely_benign | 0.1136 | benign | -0.244 | Destabilizing | None | N | 0.326 | neutral | N | 0.372462954 | None | None | N |
K/V | 0.2452 | likely_benign | 0.2862 | benign | 0.382 | Stabilizing | 0.081 | N | 0.53 | neutral | None | None | None | None | N |
K/W | 0.7057 | likely_pathogenic | 0.7413 | pathogenic | -0.045 | Destabilizing | 0.935 | D | 0.6 | neutral | None | None | None | None | N |
K/Y | 0.5787 | likely_pathogenic | 0.6275 | pathogenic | 0.289 | Stabilizing | 0.555 | D | 0.583 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.