Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18024 | 54295;54296;54297 | chr2:178605107;178605106;178605105 | chr2:179469834;179469833;179469832 |
N2AB | 16383 | 49372;49373;49374 | chr2:178605107;178605106;178605105 | chr2:179469834;179469833;179469832 |
N2A | 15456 | 46591;46592;46593 | chr2:178605107;178605106;178605105 | chr2:179469834;179469833;179469832 |
N2B | 8959 | 27100;27101;27102 | chr2:178605107;178605106;178605105 | chr2:179469834;179469833;179469832 |
Novex-1 | 9084 | 27475;27476;27477 | chr2:178605107;178605106;178605105 | chr2:179469834;179469833;179469832 |
Novex-2 | 9151 | 27676;27677;27678 | chr2:178605107;178605106;178605105 | chr2:179469834;179469833;179469832 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/G | None | None | 0.024 | N | 0.453 | 0.085 | 0.124217242631 | gnomAD-4.0.0 | 1.59334E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86229E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.1087 | likely_benign | 0.1083 | benign | -0.582 | Destabilizing | 0.007 | N | 0.365 | neutral | None | None | None | None | N |
S/C | 0.2614 | likely_benign | 0.2358 | benign | -0.403 | Destabilizing | 0.295 | N | 0.589 | neutral | N | 0.497249807 | None | None | N |
S/D | 0.6998 | likely_pathogenic | 0.6705 | pathogenic | -0.437 | Destabilizing | 0.072 | N | 0.479 | neutral | None | None | None | None | N |
S/E | 0.7104 | likely_pathogenic | 0.7027 | pathogenic | -0.495 | Destabilizing | 0.072 | N | 0.46 | neutral | None | None | None | None | N |
S/F | 0.4366 | ambiguous | 0.4109 | ambiguous | -0.981 | Destabilizing | 0.072 | N | 0.609 | neutral | None | None | None | None | N |
S/G | 0.15 | likely_benign | 0.1508 | benign | -0.76 | Destabilizing | 0.024 | N | 0.453 | neutral | N | 0.465540033 | None | None | N |
S/H | 0.5782 | likely_pathogenic | 0.5607 | ambiguous | -1.346 | Destabilizing | 0.628 | D | 0.588 | neutral | None | None | None | None | N |
S/I | 0.3453 | ambiguous | 0.2989 | benign | -0.229 | Destabilizing | 0.012 | N | 0.517 | neutral | N | 0.459635568 | None | None | N |
S/K | 0.8345 | likely_pathogenic | 0.8284 | pathogenic | -0.721 | Destabilizing | 0.031 | N | 0.449 | neutral | None | None | None | None | N |
S/L | 0.1871 | likely_benign | 0.1717 | benign | -0.229 | Destabilizing | None | N | 0.431 | neutral | None | None | None | None | N |
S/M | 0.2555 | likely_benign | 0.2484 | benign | 0.202 | Stabilizing | 0.001 | N | 0.404 | neutral | None | None | None | None | N |
S/N | 0.2496 | likely_benign | 0.2274 | benign | -0.539 | Destabilizing | 0.055 | N | 0.473 | neutral | N | 0.433043613 | None | None | N |
S/P | 0.8169 | likely_pathogenic | 0.7739 | pathogenic | -0.316 | Destabilizing | 0.136 | N | 0.588 | neutral | None | None | None | None | N |
S/Q | 0.6078 | likely_pathogenic | 0.6252 | pathogenic | -0.841 | Destabilizing | 0.136 | N | 0.543 | neutral | None | None | None | None | N |
S/R | 0.7904 | likely_pathogenic | 0.7893 | pathogenic | -0.498 | Destabilizing | 0.055 | N | 0.588 | neutral | N | 0.440009657 | None | None | N |
S/T | 0.0968 | likely_benign | 0.0912 | benign | -0.586 | Destabilizing | None | N | 0.175 | neutral | N | 0.389639552 | None | None | N |
S/V | 0.2985 | likely_benign | 0.2668 | benign | -0.316 | Destabilizing | None | N | 0.449 | neutral | None | None | None | None | N |
S/W | 0.5294 | ambiguous | 0.4955 | ambiguous | -0.943 | Destabilizing | 0.864 | D | 0.609 | neutral | None | None | None | None | N |
S/Y | 0.3592 | ambiguous | 0.3338 | benign | -0.687 | Destabilizing | 0.356 | N | 0.636 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.