Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18025 | 54298;54299;54300 | chr2:178605104;178605103;178605102 | chr2:179469831;179469830;179469829 |
N2AB | 16384 | 49375;49376;49377 | chr2:178605104;178605103;178605102 | chr2:179469831;179469830;179469829 |
N2A | 15457 | 46594;46595;46596 | chr2:178605104;178605103;178605102 | chr2:179469831;179469830;179469829 |
N2B | 8960 | 27103;27104;27105 | chr2:178605104;178605103;178605102 | chr2:179469831;179469830;179469829 |
Novex-1 | 9085 | 27478;27479;27480 | chr2:178605104;178605103;178605102 | chr2:179469831;179469830;179469829 |
Novex-2 | 9152 | 27679;27680;27681 | chr2:178605104;178605103;178605102 | chr2:179469831;179469830;179469829 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | None | None | 0.625 | N | 0.612 | 0.112 | 0.214338557667 | gnomAD-4.0.0 | 1.59332E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86226E-06 | 0 | 0 |
E/K | rs2054470493 | None | 0.801 | N | 0.563 | 0.138 | 0.191931220699 | gnomAD-4.0.0 | 1.5934E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.78164E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2205 | likely_benign | 0.2148 | benign | -0.341 | Destabilizing | 0.625 | D | 0.575 | neutral | N | 0.438276074 | None | None | N |
E/C | 0.8851 | likely_pathogenic | 0.8959 | pathogenic | 0.161 | Stabilizing | 0.998 | D | 0.609 | neutral | None | None | None | None | N |
E/D | 0.1975 | likely_benign | 0.1811 | benign | -0.751 | Destabilizing | 0.012 | N | 0.238 | neutral | N | 0.408262598 | None | None | N |
E/F | 0.7644 | likely_pathogenic | 0.7628 | pathogenic | -0.613 | Destabilizing | 0.974 | D | 0.627 | neutral | None | None | None | None | N |
E/G | 0.3802 | ambiguous | 0.3497 | ambiguous | -0.579 | Destabilizing | 0.625 | D | 0.612 | neutral | N | 0.411321546 | None | None | N |
E/H | 0.5607 | ambiguous | 0.5676 | pathogenic | -0.897 | Destabilizing | 0.974 | D | 0.611 | neutral | None | None | None | None | N |
E/I | 0.3335 | likely_benign | 0.356 | ambiguous | 0.26 | Stabilizing | 0.728 | D | 0.623 | neutral | None | None | None | None | N |
E/K | 0.2921 | likely_benign | 0.2949 | benign | 0.184 | Stabilizing | 0.801 | D | 0.563 | neutral | N | 0.445356762 | None | None | N |
E/L | 0.476 | ambiguous | 0.4881 | ambiguous | 0.26 | Stabilizing | 0.728 | D | 0.605 | neutral | None | None | None | None | N |
E/M | 0.4936 | ambiguous | 0.5046 | ambiguous | 0.678 | Stabilizing | 0.974 | D | 0.622 | neutral | None | None | None | None | N |
E/N | 0.3637 | ambiguous | 0.3549 | ambiguous | -0.04 | Destabilizing | 0.029 | N | 0.26 | neutral | None | None | None | None | N |
E/P | 0.9829 | likely_pathogenic | 0.9725 | pathogenic | 0.081 | Stabilizing | 0.974 | D | 0.643 | neutral | None | None | None | None | N |
E/Q | 0.2115 | likely_benign | 0.2089 | benign | -0.022 | Destabilizing | 0.891 | D | 0.559 | neutral | N | 0.42900323 | None | None | N |
E/R | 0.4536 | ambiguous | 0.4536 | ambiguous | 0.101 | Stabilizing | 0.915 | D | 0.59 | neutral | None | None | None | None | N |
E/S | 0.2879 | likely_benign | 0.273 | benign | -0.238 | Destabilizing | 0.525 | D | 0.569 | neutral | None | None | None | None | N |
E/T | 0.2374 | likely_benign | 0.2465 | benign | -0.045 | Destabilizing | 0.067 | N | 0.361 | neutral | None | None | None | None | N |
E/V | 0.2125 | likely_benign | 0.2232 | benign | 0.081 | Stabilizing | 0.051 | N | 0.511 | neutral | N | 0.45382153 | None | None | N |
E/W | 0.9332 | likely_pathogenic | 0.9327 | pathogenic | -0.62 | Destabilizing | 0.998 | D | 0.635 | neutral | None | None | None | None | N |
E/Y | 0.7141 | likely_pathogenic | 0.7067 | pathogenic | -0.39 | Destabilizing | 0.991 | D | 0.637 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.