Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18030 | 54313;54314;54315 | chr2:178605089;178605088;178605087 | chr2:179469816;179469815;179469814 |
N2AB | 16389 | 49390;49391;49392 | chr2:178605089;178605088;178605087 | chr2:179469816;179469815;179469814 |
N2A | 15462 | 46609;46610;46611 | chr2:178605089;178605088;178605087 | chr2:179469816;179469815;179469814 |
N2B | 8965 | 27118;27119;27120 | chr2:178605089;178605088;178605087 | chr2:179469816;179469815;179469814 |
Novex-1 | 9090 | 27493;27494;27495 | chr2:178605089;178605088;178605087 | chr2:179469816;179469815;179469814 |
Novex-2 | 9157 | 27694;27695;27696 | chr2:178605089;178605088;178605087 | chr2:179469816;179469815;179469814 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/F | None | None | 0.864 | N | 0.593 | 0.504 | 0.532744658726 | gnomAD-4.0.0 | 1.3692E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79975E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.8025 | likely_pathogenic | 0.8951 | pathogenic | -2.572 | Highly Destabilizing | 0.547 | D | 0.742 | deleterious | None | None | None | None | N |
L/C | 0.765 | likely_pathogenic | 0.8851 | pathogenic | -2.043 | Highly Destabilizing | 0.985 | D | 0.744 | deleterious | None | None | None | None | N |
L/D | 0.9989 | likely_pathogenic | 0.9995 | pathogenic | -3.504 | Highly Destabilizing | 0.981 | D | 0.871 | deleterious | None | None | None | None | N |
L/E | 0.9937 | likely_pathogenic | 0.9968 | pathogenic | -3.198 | Highly Destabilizing | 0.945 | D | 0.862 | deleterious | None | None | None | None | N |
L/F | 0.3155 | likely_benign | 0.4752 | ambiguous | -1.642 | Destabilizing | 0.864 | D | 0.593 | neutral | N | 0.493719224 | None | None | N |
L/G | 0.9696 | likely_pathogenic | 0.9871 | pathogenic | -3.17 | Highly Destabilizing | 0.945 | D | 0.857 | deleterious | None | None | None | None | N |
L/H | 0.9814 | likely_pathogenic | 0.9914 | pathogenic | -2.939 | Highly Destabilizing | 0.993 | D | 0.855 | deleterious | D | 0.542489034 | None | None | N |
L/I | 0.0855 | likely_benign | 0.1168 | benign | -0.791 | Destabilizing | 0.114 | N | 0.619 | neutral | D | 0.526312504 | None | None | N |
L/K | 0.989 | likely_pathogenic | 0.9939 | pathogenic | -2.169 | Highly Destabilizing | 0.945 | D | 0.842 | deleterious | None | None | None | None | N |
L/M | 0.2203 | likely_benign | 0.2883 | benign | -0.931 | Destabilizing | 0.332 | N | 0.535 | neutral | None | None | None | None | N |
L/N | 0.9922 | likely_pathogenic | 0.9963 | pathogenic | -2.833 | Highly Destabilizing | 0.981 | D | 0.881 | deleterious | None | None | None | None | N |
L/P | 0.9942 | likely_pathogenic | 0.9973 | pathogenic | -1.373 | Destabilizing | 0.975 | D | 0.871 | deleterious | D | 0.55384534 | None | None | N |
L/Q | 0.979 | likely_pathogenic | 0.9888 | pathogenic | -2.53 | Highly Destabilizing | 0.945 | D | 0.859 | deleterious | None | None | None | None | N |
L/R | 0.9786 | likely_pathogenic | 0.9878 | pathogenic | -2.153 | Highly Destabilizing | 0.928 | D | 0.852 | deleterious | D | 0.55384534 | None | None | N |
L/S | 0.984 | likely_pathogenic | 0.9934 | pathogenic | -3.402 | Highly Destabilizing | 0.894 | D | 0.835 | deleterious | None | None | None | None | N |
L/T | 0.9257 | likely_pathogenic | 0.969 | pathogenic | -2.93 | Highly Destabilizing | 0.894 | D | 0.759 | deleterious | None | None | None | None | N |
L/V | 0.0932 | likely_benign | 0.1636 | benign | -1.373 | Destabilizing | 0.006 | N | 0.373 | neutral | N | 0.51257072 | None | None | N |
L/W | 0.9023 | likely_pathogenic | 0.9514 | pathogenic | -2.132 | Highly Destabilizing | 0.995 | D | 0.827 | deleterious | None | None | None | None | N |
L/Y | 0.8778 | likely_pathogenic | 0.9378 | pathogenic | -1.823 | Destabilizing | 0.945 | D | 0.737 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.