Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18034 | 54325;54326;54327 | chr2:178605077;178605076;178605075 | chr2:179469804;179469803;179469802 |
N2AB | 16393 | 49402;49403;49404 | chr2:178605077;178605076;178605075 | chr2:179469804;179469803;179469802 |
N2A | 15466 | 46621;46622;46623 | chr2:178605077;178605076;178605075 | chr2:179469804;179469803;179469802 |
N2B | 8969 | 27130;27131;27132 | chr2:178605077;178605076;178605075 | chr2:179469804;179469803;179469802 |
Novex-1 | 9094 | 27505;27506;27507 | chr2:178605077;178605076;178605075 | chr2:179469804;179469803;179469802 |
Novex-2 | 9161 | 27706;27707;27708 | chr2:178605077;178605076;178605075 | chr2:179469804;179469803;179469802 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/R | rs747897792 | 0.299 | 0.642 | N | 0.277 | 0.12 | 0.178374595973 | gnomAD-2.1.1 | 1.21E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 9.81E-05 | None | 0 | 0 | 0 |
K/R | rs747897792 | 0.299 | 0.642 | N | 0.277 | 0.12 | 0.178374595973 | gnomAD-4.0.0 | 6.3743E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 5.73691E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.1337 | likely_benign | 0.1436 | benign | -0.01 | Destabilizing | 0.001 | N | 0.1 | neutral | None | None | None | None | N |
K/C | 0.4333 | ambiguous | 0.4699 | ambiguous | -0.138 | Destabilizing | 0.981 | D | 0.3 | neutral | None | None | None | None | N |
K/D | 0.3022 | likely_benign | 0.2925 | benign | 0.048 | Stabilizing | 0.704 | D | 0.307 | neutral | None | None | None | None | N |
K/E | 0.1176 | likely_benign | 0.1069 | benign | 0.08 | Stabilizing | 0.425 | N | 0.225 | neutral | N | 0.393986579 | None | None | N |
K/F | 0.4907 | ambiguous | 0.5042 | ambiguous | -0.042 | Destabilizing | 0.893 | D | 0.364 | neutral | None | None | None | None | N |
K/G | 0.2436 | likely_benign | 0.2468 | benign | -0.265 | Destabilizing | 0.003 | N | 0.104 | neutral | None | None | None | None | N |
K/H | 0.1855 | likely_benign | 0.1894 | benign | -0.572 | Destabilizing | 0.981 | D | 0.292 | neutral | None | None | None | None | N |
K/I | 0.196 | likely_benign | 0.2063 | benign | 0.594 | Stabilizing | 0.27 | N | 0.311 | neutral | N | 0.510371033 | None | None | N |
K/L | 0.2019 | likely_benign | 0.2047 | benign | 0.594 | Stabilizing | 0.329 | N | 0.259 | neutral | None | None | None | None | N |
K/M | 0.1401 | likely_benign | 0.1393 | benign | 0.349 | Stabilizing | 0.944 | D | 0.295 | neutral | None | None | None | None | N |
K/N | 0.1974 | likely_benign | 0.1896 | benign | 0.165 | Stabilizing | 0.642 | D | 0.209 | neutral | N | 0.403256636 | None | None | N |
K/P | 0.7427 | likely_pathogenic | 0.6892 | pathogenic | 0.423 | Stabilizing | 0.828 | D | 0.368 | neutral | None | None | None | None | N |
K/Q | 0.1025 | likely_benign | 0.0975 | benign | 0.02 | Stabilizing | 0.784 | D | 0.281 | neutral | N | 0.4534776 | None | None | N |
K/R | 0.0828 | likely_benign | 0.0779 | benign | -0.146 | Destabilizing | 0.642 | D | 0.277 | neutral | N | 0.428888587 | None | None | N |
K/S | 0.1834 | likely_benign | 0.1903 | benign | -0.329 | Destabilizing | 0.004 | N | 0.076 | neutral | None | None | None | None | N |
K/T | 0.0913 | likely_benign | 0.094 | benign | -0.135 | Destabilizing | 0.27 | N | 0.277 | neutral | N | 0.491091839 | None | None | N |
K/V | 0.1429 | likely_benign | 0.1531 | benign | 0.423 | Stabilizing | 0.001 | N | 0.088 | neutral | None | None | None | None | N |
K/W | 0.6274 | likely_pathogenic | 0.6209 | pathogenic | -0.034 | Destabilizing | 0.995 | D | 0.291 | neutral | None | None | None | None | N |
K/Y | 0.3983 | ambiguous | 0.3932 | ambiguous | 0.294 | Stabilizing | 0.944 | D | 0.355 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.