Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18055 | 54388;54389;54390 | chr2:178605014;178605013;178605012 | chr2:179469741;179469740;179469739 |
N2AB | 16414 | 49465;49466;49467 | chr2:178605014;178605013;178605012 | chr2:179469741;179469740;179469739 |
N2A | 15487 | 46684;46685;46686 | chr2:178605014;178605013;178605012 | chr2:179469741;179469740;179469739 |
N2B | 8990 | 27193;27194;27195 | chr2:178605014;178605013;178605012 | chr2:179469741;179469740;179469739 |
Novex-1 | 9115 | 27568;27569;27570 | chr2:178605014;178605013;178605012 | chr2:179469741;179469740;179469739 |
Novex-2 | 9182 | 27769;27770;27771 | chr2:178605014;178605013;178605012 | chr2:179469741;179469740;179469739 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/L | rs776312018 | -0.936 | 0.454 | N | 0.466 | 0.197 | 0.406806705197 | gnomAD-4.0.0 | 1.62352E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.4699E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.4277 | ambiguous | 0.4076 | ambiguous | -1.073 | Destabilizing | 0.525 | D | 0.414 | neutral | None | None | None | None | N |
F/C | 0.3135 | likely_benign | 0.2931 | benign | -0.3 | Destabilizing | 0.997 | D | 0.509 | neutral | N | 0.511644122 | None | None | N |
F/D | 0.7323 | likely_pathogenic | 0.7118 | pathogenic | 0.622 | Stabilizing | 0.842 | D | 0.573 | neutral | None | None | None | None | N |
F/E | 0.6843 | likely_pathogenic | 0.6543 | pathogenic | 0.604 | Stabilizing | 0.842 | D | 0.534 | neutral | None | None | None | None | N |
F/G | 0.673 | likely_pathogenic | 0.6618 | pathogenic | -1.286 | Destabilizing | 0.842 | D | 0.518 | neutral | None | None | None | None | N |
F/H | 0.385 | ambiguous | 0.3759 | ambiguous | 0.131 | Stabilizing | 0.949 | D | 0.561 | neutral | None | None | None | None | N |
F/I | 0.2731 | likely_benign | 0.2413 | benign | -0.52 | Destabilizing | 0.801 | D | 0.501 | neutral | N | 0.44207218 | None | None | N |
F/K | 0.6423 | likely_pathogenic | 0.6291 | pathogenic | -0.153 | Destabilizing | 0.029 | N | 0.33 | neutral | None | None | None | None | N |
F/L | 0.8062 | likely_pathogenic | 0.7956 | pathogenic | -0.52 | Destabilizing | 0.454 | N | 0.466 | neutral | N | 0.441725464 | None | None | N |
F/M | 0.4905 | ambiguous | 0.453 | ambiguous | -0.376 | Destabilizing | 0.991 | D | 0.51 | neutral | None | None | None | None | N |
F/N | 0.4883 | ambiguous | 0.4453 | ambiguous | -0.071 | Destabilizing | 0.842 | D | 0.577 | neutral | None | None | None | None | N |
F/P | 0.9663 | likely_pathogenic | 0.9688 | pathogenic | -0.685 | Destabilizing | 0.974 | D | 0.573 | neutral | None | None | None | None | N |
F/Q | 0.5219 | ambiguous | 0.4987 | ambiguous | -0.155 | Destabilizing | 0.949 | D | 0.572 | neutral | None | None | None | None | N |
F/R | 0.5684 | likely_pathogenic | 0.5737 | pathogenic | 0.355 | Stabilizing | 0.728 | D | 0.569 | neutral | None | None | None | None | N |
F/S | 0.2381 | likely_benign | 0.22 | benign | -0.765 | Destabilizing | 0.136 | N | 0.291 | neutral | N | 0.356413279 | None | None | N |
F/T | 0.3171 | likely_benign | 0.2895 | benign | -0.691 | Destabilizing | 0.728 | D | 0.528 | neutral | None | None | None | None | N |
F/V | 0.245 | likely_benign | 0.2249 | benign | -0.685 | Destabilizing | 0.801 | D | 0.519 | neutral | N | 0.426545368 | None | None | N |
F/W | 0.524 | ambiguous | 0.5324 | ambiguous | -0.268 | Destabilizing | 0.993 | D | 0.511 | neutral | None | None | None | None | N |
F/Y | 0.1326 | likely_benign | 0.1312 | benign | -0.268 | Destabilizing | 0.012 | N | 0.136 | neutral | N | 0.423659778 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.