Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18058 | 54397;54398;54399 | chr2:178605005;178605004;178605003 | chr2:179469732;179469731;179469730 |
N2AB | 16417 | 49474;49475;49476 | chr2:178605005;178605004;178605003 | chr2:179469732;179469731;179469730 |
N2A | 15490 | 46693;46694;46695 | chr2:178605005;178605004;178605003 | chr2:179469732;179469731;179469730 |
N2B | 8993 | 27202;27203;27204 | chr2:178605005;178605004;178605003 | chr2:179469732;179469731;179469730 |
Novex-1 | 9118 | 27577;27578;27579 | chr2:178605005;178605004;178605003 | chr2:179469732;179469731;179469730 |
Novex-2 | 9185 | 27778;27779;27780 | chr2:178605005;178605004;178605003 | chr2:179469732;179469731;179469730 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | None | None | 0.998 | N | 0.519 | 0.29 | 0.634485840324 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 6.07533E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.4647 | ambiguous | 0.5043 | ambiguous | -2.019 | Highly Destabilizing | 0.998 | D | 0.519 | neutral | N | 0.458751 | None | None | N |
V/C | 0.7868 | likely_pathogenic | 0.7909 | pathogenic | -1.828 | Destabilizing | 1.0 | D | 0.832 | deleterious | None | None | None | None | N |
V/D | 0.9911 | likely_pathogenic | 0.9927 | pathogenic | -2.001 | Highly Destabilizing | 1.0 | D | 0.901 | deleterious | N | 0.50599322 | None | None | N |
V/E | 0.9793 | likely_pathogenic | 0.9798 | pathogenic | -1.862 | Destabilizing | 1.0 | D | 0.873 | deleterious | None | None | None | None | N |
V/F | 0.6002 | likely_pathogenic | 0.5806 | pathogenic | -1.354 | Destabilizing | 0.999 | D | 0.863 | deleterious | N | 0.485441742 | None | None | N |
V/G | 0.7937 | likely_pathogenic | 0.8014 | pathogenic | -2.507 | Highly Destabilizing | 1.0 | D | 0.877 | deleterious | N | 0.512609701 | None | None | N |
V/H | 0.9867 | likely_pathogenic | 0.9867 | pathogenic | -2.115 | Highly Destabilizing | 1.0 | D | 0.899 | deleterious | None | None | None | None | N |
V/I | 0.0901 | likely_benign | 0.089 | benign | -0.705 | Destabilizing | 0.767 | D | 0.311 | neutral | N | 0.435839641 | None | None | N |
V/K | 0.9865 | likely_pathogenic | 0.9831 | pathogenic | -1.744 | Destabilizing | 1.0 | D | 0.877 | deleterious | None | None | None | None | N |
V/L | 0.4745 | ambiguous | 0.4509 | ambiguous | -0.705 | Destabilizing | 0.981 | D | 0.533 | neutral | N | 0.495327875 | None | None | N |
V/M | 0.4408 | ambiguous | 0.4079 | ambiguous | -0.732 | Destabilizing | 1.0 | D | 0.76 | deleterious | None | None | None | None | N |
V/N | 0.9606 | likely_pathogenic | 0.9653 | pathogenic | -1.835 | Destabilizing | 1.0 | D | 0.915 | deleterious | None | None | None | None | N |
V/P | 0.9898 | likely_pathogenic | 0.9919 | pathogenic | -1.111 | Destabilizing | 1.0 | D | 0.889 | deleterious | None | None | None | None | N |
V/Q | 0.9663 | likely_pathogenic | 0.9642 | pathogenic | -1.79 | Destabilizing | 1.0 | D | 0.897 | deleterious | None | None | None | None | N |
V/R | 0.9731 | likely_pathogenic | 0.9708 | pathogenic | -1.436 | Destabilizing | 1.0 | D | 0.911 | deleterious | None | None | None | None | N |
V/S | 0.8079 | likely_pathogenic | 0.8244 | pathogenic | -2.538 | Highly Destabilizing | 1.0 | D | 0.867 | deleterious | None | None | None | None | N |
V/T | 0.6101 | likely_pathogenic | 0.6207 | pathogenic | -2.246 | Highly Destabilizing | 0.998 | D | 0.638 | neutral | None | None | None | None | N |
V/W | 0.9898 | likely_pathogenic | 0.9878 | pathogenic | -1.678 | Destabilizing | 1.0 | D | 0.883 | deleterious | None | None | None | None | N |
V/Y | 0.9482 | likely_pathogenic | 0.9442 | pathogenic | -1.353 | Destabilizing | 1.0 | D | 0.871 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.