Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18061 | 54406;54407;54408 | chr2:178604996;178604995;178604994 | chr2:179469723;179469722;179469721 |
N2AB | 16420 | 49483;49484;49485 | chr2:178604996;178604995;178604994 | chr2:179469723;179469722;179469721 |
N2A | 15493 | 46702;46703;46704 | chr2:178604996;178604995;178604994 | chr2:179469723;179469722;179469721 |
N2B | 8996 | 27211;27212;27213 | chr2:178604996;178604995;178604994 | chr2:179469723;179469722;179469721 |
Novex-1 | 9121 | 27586;27587;27588 | chr2:178604996;178604995;178604994 | chr2:179469723;179469722;179469721 |
Novex-2 | 9188 | 27787;27788;27789 | chr2:178604996;178604995;178604994 | chr2:179469723;179469722;179469721 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | rs757026449 | -1.092 | 0.993 | N | 0.331 | 0.202 | 0.292423486923 | gnomAD-2.1.1 | 8.49E-06 | None | None | None | None | N | None | 0 | 5.99E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
E/D | rs757026449 | -1.092 | 0.993 | N | 0.331 | 0.202 | 0.292423486923 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 6.56E-05 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/D | rs757026449 | -1.092 | 0.993 | N | 0.331 | 0.202 | 0.292423486923 | gnomAD-4.0.0 | 3.93583E-06 | None | None | None | None | N | None | 0 | 5.19409E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/K | None | None | 0.979 | N | 0.322 | 0.338 | 0.393471546983 | gnomAD-4.0.0 | 1.63943E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.94473E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.322 | likely_benign | 0.45 | ambiguous | -0.757 | Destabilizing | 0.906 | D | 0.329 | neutral | N | 0.497906821 | None | None | N |
E/C | 0.9379 | likely_pathogenic | 0.9662 | pathogenic | -0.664 | Destabilizing | 1.0 | D | 0.467 | neutral | None | None | None | None | N |
E/D | 0.2105 | likely_benign | 0.2761 | benign | -1.561 | Destabilizing | 0.993 | D | 0.331 | neutral | N | 0.468240061 | None | None | N |
E/F | 0.8671 | likely_pathogenic | 0.9243 | pathogenic | 0.022 | Stabilizing | 0.991 | D | 0.479 | neutral | None | None | None | None | N |
E/G | 0.6002 | likely_pathogenic | 0.7138 | pathogenic | -1.19 | Destabilizing | 0.979 | D | 0.411 | neutral | N | 0.508725017 | None | None | N |
E/H | 0.72 | likely_pathogenic | 0.8114 | pathogenic | -0.401 | Destabilizing | 0.999 | D | 0.356 | neutral | None | None | None | None | N |
E/I | 0.448 | ambiguous | 0.5894 | pathogenic | 0.454 | Stabilizing | 0.939 | D | 0.465 | neutral | None | None | None | None | N |
E/K | 0.5447 | ambiguous | 0.6379 | pathogenic | -1.322 | Destabilizing | 0.979 | D | 0.322 | neutral | N | 0.472451016 | None | None | N |
E/L | 0.6056 | likely_pathogenic | 0.7268 | pathogenic | 0.454 | Stabilizing | 0.039 | N | 0.31 | neutral | None | None | None | None | N |
E/M | 0.5997 | likely_pathogenic | 0.7256 | pathogenic | 0.964 | Stabilizing | 0.546 | D | 0.295 | neutral | None | None | None | None | N |
E/N | 0.4429 | ambiguous | 0.5969 | pathogenic | -1.765 | Destabilizing | 0.999 | D | 0.347 | neutral | None | None | None | None | N |
E/P | 0.9916 | likely_pathogenic | 0.9963 | pathogenic | 0.071 | Stabilizing | 0.999 | D | 0.407 | neutral | None | None | None | None | N |
E/Q | 0.2937 | likely_benign | 0.3732 | ambiguous | -1.52 | Destabilizing | 0.979 | D | 0.381 | neutral | N | 0.483476086 | None | None | N |
E/R | 0.6869 | likely_pathogenic | 0.7672 | pathogenic | -0.998 | Destabilizing | 0.995 | D | 0.338 | neutral | None | None | None | None | N |
E/S | 0.3926 | ambiguous | 0.5298 | ambiguous | -2.174 | Highly Destabilizing | 0.984 | D | 0.281 | neutral | None | None | None | None | N |
E/T | 0.3513 | ambiguous | 0.4862 | ambiguous | -1.814 | Destabilizing | 0.984 | D | 0.329 | neutral | None | None | None | None | N |
E/V | 0.2906 | likely_benign | 0.4022 | ambiguous | 0.071 | Stabilizing | 0.828 | D | 0.381 | neutral | N | 0.482689439 | None | None | N |
E/W | 0.9657 | likely_pathogenic | 0.9805 | pathogenic | 0.131 | Stabilizing | 1.0 | D | 0.512 | neutral | None | None | None | None | N |
E/Y | 0.8281 | likely_pathogenic | 0.9034 | pathogenic | 0.201 | Stabilizing | 0.999 | D | 0.46 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.