Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC1806554418;54419;54420 chr2:178604896;178604895;178604894chr2:179469623;179469622;179469621
N2AB1642449495;49496;49497 chr2:178604896;178604895;178604894chr2:179469623;179469622;179469621
N2A1549746714;46715;46716 chr2:178604896;178604895;178604894chr2:179469623;179469622;179469621
N2B900027223;27224;27225 chr2:178604896;178604895;178604894chr2:179469623;179469622;179469621
Novex-1912527598;27599;27600 chr2:178604896;178604895;178604894chr2:179469623;179469622;179469621
Novex-2919227799;27800;27801 chr2:178604896;178604895;178604894chr2:179469623;179469622;179469621
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: R
  • RefSeq wild type transcript codon: CGC
  • RefSeq wild type template codon: GCG
  • Domain: Fn3-19
  • Domain position: 1
  • Structural Position: 1
  • Q(SASA): 0.4
  • Predicted PPI site: I

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
R/C rs369438623 -0.759 1.0 N 0.873 0.418 None gnomAD-2.1.1 1.22E-05 None None None None I None 6.49E-05 2.94E-05 None 0 5.66E-05 None 0 None 0 0 0
R/C rs369438623 -0.759 1.0 N 0.873 0.418 None gnomAD-3.1.2 1.32E-05 None None None None I None 2.42E-05 6.57E-05 0 0 0 None 0 0 0 0 0
R/C rs369438623 -0.759 1.0 N 0.873 0.418 None 1000 genomes 1.99681E-04 None None None None I None 8E-04 0 None None 0 0 None None None 0 None
R/C rs369438623 -0.759 1.0 N 0.873 0.418 None gnomAD-4.0.0 7.45221E-06 None None None None I None 4.01273E-05 5.03423E-05 None 0 0 None 0 0 1.69765E-06 3.3125E-05 1.60462E-05
R/H rs375895183 -1.416 1.0 N 0.753 0.353 None gnomAD-2.1.1 6.5E-05 None None None None I None 0 5.86E-05 None 0 2.82358E-04 None 0 None 4.68E-05 7.18E-05 0
R/H rs375895183 -1.416 1.0 N 0.753 0.353 None gnomAD-3.1.2 4.61E-05 None None None None I None 2.42E-05 6.57E-05 0 0 3.90625E-04 None 0 0 4.42E-05 0 0
R/H rs375895183 -1.416 1.0 N 0.753 0.353 None gnomAD-4.0.0 9.19224E-05 None None None None I None 1.33933E-05 6.70848E-05 None 3.39466E-05 2.01712E-04 None 0 0 1.09502E-04 2.21078E-05 3.21007E-05
R/P rs375895183 None 1.0 N 0.826 0.439 0.350088858571 gnomAD-3.1.2 6.59E-06 None None None None I None 0 0 0 0 0 None 0 0 1.47E-05 0 0
R/P rs375895183 None 1.0 N 0.826 0.439 0.350088858571 gnomAD-4.0.0 6.59092E-06 None None None None I None 0 0 None 0 0 None 0 0 1.47306E-05 0 0

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
R/A 0.763 likely_pathogenic 0.6725 pathogenic -0.312 Destabilizing 0.998 D 0.571 neutral None None None None I
R/C 0.333 likely_benign 0.2563 benign -0.279 Destabilizing 1.0 D 0.873 deleterious N 0.469049882 None None I
R/D 0.9742 likely_pathogenic 0.9582 pathogenic -0.06 Destabilizing 0.999 D 0.839 deleterious None None None None I
R/E 0.7897 likely_pathogenic 0.706 pathogenic 0.002 Stabilizing 0.998 D 0.651 prob.neutral None None None None I
R/F 0.8897 likely_pathogenic 0.8309 pathogenic -0.494 Destabilizing 1.0 D 0.859 deleterious None None None None I
R/G 0.8127 likely_pathogenic 0.7173 pathogenic -0.526 Destabilizing 1.0 D 0.713 prob.delet. N 0.486482574 None None I
R/H 0.3105 likely_benign 0.2509 benign -0.918 Destabilizing 1.0 D 0.753 deleterious N 0.468796393 None None I
R/I 0.4742 ambiguous 0.376 ambiguous 0.225 Stabilizing 0.999 D 0.856 deleterious None None None None I
R/K 0.1476 likely_benign 0.1438 benign -0.306 Destabilizing 0.995 D 0.525 neutral None None None None I
R/L 0.6062 likely_pathogenic 0.5018 ambiguous 0.225 Stabilizing 1.0 D 0.713 prob.delet. N 0.510925606 None None I
R/M 0.649 likely_pathogenic 0.5556 ambiguous -0.018 Destabilizing 1.0 D 0.783 deleterious None None None None I
R/N 0.9144 likely_pathogenic 0.8736 pathogenic 0.148 Stabilizing 0.999 D 0.745 deleterious None None None None I
R/P 0.85 likely_pathogenic 0.809 pathogenic 0.066 Stabilizing 1.0 D 0.826 deleterious N 0.479215833 None None I
R/Q 0.233 likely_benign 0.1885 benign -0.076 Destabilizing 0.999 D 0.759 deleterious None None None None I
R/S 0.8735 likely_pathogenic 0.809 pathogenic -0.394 Destabilizing 1.0 D 0.763 deleterious N 0.509522884 None None I
R/T 0.61 likely_pathogenic 0.4977 ambiguous -0.193 Destabilizing 0.999 D 0.761 deleterious None None None None I
R/V 0.5331 ambiguous 0.4449 ambiguous 0.066 Stabilizing 0.999 D 0.801 deleterious None None None None I
R/W 0.6567 likely_pathogenic 0.5584 ambiguous -0.394 Destabilizing 1.0 D 0.886 deleterious None None None None I
R/Y 0.7985 likely_pathogenic 0.7263 pathogenic -0.021 Destabilizing 0.999 D 0.886 deleterious None None None None I

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.