Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18067 | 54424;54425;54426 | chr2:178604890;178604889;178604888 | chr2:179469617;179469616;179469615 |
N2AB | 16426 | 49501;49502;49503 | chr2:178604890;178604889;178604888 | chr2:179469617;179469616;179469615 |
N2A | 15499 | 46720;46721;46722 | chr2:178604890;178604889;178604888 | chr2:179469617;179469616;179469615 |
N2B | 9002 | 27229;27230;27231 | chr2:178604890;178604889;178604888 | chr2:179469617;179469616;179469615 |
Novex-1 | 9127 | 27604;27605;27606 | chr2:178604890;178604889;178604888 | chr2:179469617;179469616;179469615 |
Novex-2 | 9194 | 27805;27806;27807 | chr2:178604890;178604889;178604888 | chr2:179469617;179469616;179469615 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/C | rs745390353 | -0.771 | 0.989 | N | 0.733 | 0.367 | 0.411265580357 | gnomAD-2.1.1 | 4.05E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.64E-05 | None | 0 | None | 0 | 0 | 0 |
S/T | None | None | 0.022 | N | 0.304 | 0.074 | 0.199424873507 | gnomAD-4.0.0 | 3.19328E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 4.84496E-04 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.1278 | likely_benign | 0.142 | benign | -0.488 | Destabilizing | 0.005 | N | 0.334 | neutral | N | 0.503762852 | None | None | N |
S/C | 0.3186 | likely_benign | 0.3262 | benign | -0.597 | Destabilizing | 0.989 | D | 0.733 | prob.delet. | N | 0.489210005 | None | None | N |
S/D | 0.7394 | likely_pathogenic | 0.7722 | pathogenic | -1.467 | Destabilizing | 0.915 | D | 0.559 | neutral | None | None | None | None | N |
S/E | 0.8436 | likely_pathogenic | 0.8415 | pathogenic | -1.417 | Destabilizing | 0.842 | D | 0.547 | neutral | None | None | None | None | N |
S/F | 0.5404 | ambiguous | 0.5765 | pathogenic | -0.577 | Destabilizing | 0.934 | D | 0.775 | deleterious | N | 0.488956515 | None | None | N |
S/G | 0.1193 | likely_benign | 0.1288 | benign | -0.778 | Destabilizing | 0.525 | D | 0.538 | neutral | None | None | None | None | N |
S/H | 0.7306 | likely_pathogenic | 0.7532 | pathogenic | -1.368 | Destabilizing | 0.998 | D | 0.732 | prob.delet. | None | None | None | None | N |
S/I | 0.6615 | likely_pathogenic | 0.6384 | pathogenic | 0.188 | Stabilizing | 0.728 | D | 0.709 | prob.delet. | None | None | None | None | N |
S/K | 0.9375 | likely_pathogenic | 0.9403 | pathogenic | -0.857 | Destabilizing | 0.842 | D | 0.553 | neutral | None | None | None | None | N |
S/L | 0.1429 | likely_benign | 0.1785 | benign | 0.188 | Stabilizing | 0.007 | N | 0.459 | neutral | None | None | None | None | N |
S/M | 0.3674 | ambiguous | 0.3827 | ambiguous | 0.429 | Stabilizing | 0.949 | D | 0.728 | prob.delet. | None | None | None | None | N |
S/N | 0.4304 | ambiguous | 0.4433 | ambiguous | -1.153 | Destabilizing | 0.915 | D | 0.583 | neutral | None | None | None | None | N |
S/P | 0.9246 | likely_pathogenic | 0.9386 | pathogenic | -0.002 | Destabilizing | 0.966 | D | 0.717 | prob.delet. | N | 0.488196046 | None | None | N |
S/Q | 0.7921 | likely_pathogenic | 0.7999 | pathogenic | -1.246 | Destabilizing | 0.974 | D | 0.589 | neutral | None | None | None | None | N |
S/R | 0.9353 | likely_pathogenic | 0.9374 | pathogenic | -0.817 | Destabilizing | 0.974 | D | 0.717 | prob.delet. | None | None | None | None | N |
S/T | 0.1647 | likely_benign | 0.1697 | benign | -0.901 | Destabilizing | 0.022 | N | 0.304 | neutral | N | 0.481771427 | None | None | N |
S/V | 0.5671 | likely_pathogenic | 0.5751 | pathogenic | -0.002 | Destabilizing | 0.525 | D | 0.674 | neutral | None | None | None | None | N |
S/W | 0.7826 | likely_pathogenic | 0.7963 | pathogenic | -0.737 | Destabilizing | 0.998 | D | 0.803 | deleterious | None | None | None | None | N |
S/Y | 0.5406 | ambiguous | 0.5715 | pathogenic | -0.38 | Destabilizing | 0.989 | D | 0.794 | deleterious | N | 0.488956515 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.