Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18068 | 54427;54428;54429 | chr2:178604887;178604886;178604885 | chr2:179469614;179469613;179469612 |
N2AB | 16427 | 49504;49505;49506 | chr2:178604887;178604886;178604885 | chr2:179469614;179469613;179469612 |
N2A | 15500 | 46723;46724;46725 | chr2:178604887;178604886;178604885 | chr2:179469614;179469613;179469612 |
N2B | 9003 | 27232;27233;27234 | chr2:178604887;178604886;178604885 | chr2:179469614;179469613;179469612 |
Novex-1 | 9128 | 27607;27608;27609 | chr2:178604887;178604886;178604885 | chr2:179469614;179469613;179469612 |
Novex-2 | 9195 | 27808;27809;27810 | chr2:178604887;178604886;178604885 | chr2:179469614;179469613;179469612 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | None | None | 1.0 | N | 0.833 | 0.412 | 0.327686398923 | gnomAD-4.0.0 | 4.79658E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 6.30217E-06 | 0 | 0 |
P/S | None | None | 1.0 | N | 0.843 | 0.447 | 0.401042353794 | gnomAD-4.0.0 | 6.85225E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.0031E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.1235 | likely_benign | 0.1068 | benign | -1.569 | Destabilizing | 1.0 | D | 0.833 | deleterious | N | 0.489558617 | None | None | N |
P/C | 0.7613 | likely_pathogenic | 0.7461 | pathogenic | -1.095 | Destabilizing | 1.0 | D | 0.833 | deleterious | None | None | None | None | N |
P/D | 0.9602 | likely_pathogenic | 0.9405 | pathogenic | -2.1 | Highly Destabilizing | 1.0 | D | 0.84 | deleterious | None | None | None | None | N |
P/E | 0.7235 | likely_pathogenic | 0.6755 | pathogenic | -2.142 | Highly Destabilizing | 1.0 | D | 0.841 | deleterious | None | None | None | None | N |
P/F | 0.8519 | likely_pathogenic | 0.8482 | pathogenic | -1.442 | Destabilizing | 1.0 | D | 0.858 | deleterious | None | None | None | None | N |
P/G | 0.7546 | likely_pathogenic | 0.6883 | pathogenic | -1.832 | Destabilizing | 1.0 | D | 0.886 | deleterious | None | None | None | None | N |
P/H | 0.6789 | likely_pathogenic | 0.6231 | pathogenic | -1.29 | Destabilizing | 1.0 | D | 0.851 | deleterious | None | None | None | None | N |
P/I | 0.5922 | likely_pathogenic | 0.5907 | pathogenic | -0.947 | Destabilizing | 1.0 | D | 0.843 | deleterious | None | None | None | None | N |
P/K | 0.6417 | likely_pathogenic | 0.606 | pathogenic | -1.261 | Destabilizing | 1.0 | D | 0.839 | deleterious | None | None | None | None | N |
P/L | 0.3892 | ambiguous | 0.3857 | ambiguous | -0.947 | Destabilizing | 1.0 | D | 0.871 | deleterious | N | 0.50537893 | None | None | N |
P/M | 0.6232 | likely_pathogenic | 0.6275 | pathogenic | -0.624 | Destabilizing | 1.0 | D | 0.846 | deleterious | None | None | None | None | N |
P/N | 0.897 | likely_pathogenic | 0.8595 | pathogenic | -1.091 | Destabilizing | 1.0 | D | 0.874 | deleterious | None | None | None | None | N |
P/Q | 0.465 | ambiguous | 0.4211 | ambiguous | -1.396 | Destabilizing | 1.0 | D | 0.843 | deleterious | N | 0.489614852 | None | None | N |
P/R | 0.5067 | ambiguous | 0.4695 | ambiguous | -0.612 | Destabilizing | 1.0 | D | 0.875 | deleterious | N | 0.495717691 | None | None | N |
P/S | 0.4199 | ambiguous | 0.3509 | ambiguous | -1.484 | Destabilizing | 1.0 | D | 0.843 | deleterious | N | 0.474713374 | None | None | N |
P/T | 0.4276 | ambiguous | 0.3665 | ambiguous | -1.437 | Destabilizing | 1.0 | D | 0.837 | deleterious | N | 0.500099011 | None | None | N |
P/V | 0.4131 | ambiguous | 0.4081 | ambiguous | -1.123 | Destabilizing | 1.0 | D | 0.883 | deleterious | None | None | None | None | N |
P/W | 0.9556 | likely_pathogenic | 0.9517 | pathogenic | -1.581 | Destabilizing | 1.0 | D | 0.847 | deleterious | None | None | None | None | N |
P/Y | 0.8683 | likely_pathogenic | 0.8583 | pathogenic | -1.314 | Destabilizing | 1.0 | D | 0.867 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.