Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18072 | 54439;54440;54441 | chr2:178604875;178604874;178604873 | chr2:179469602;179469601;179469600 |
N2AB | 16431 | 49516;49517;49518 | chr2:178604875;178604874;178604873 | chr2:179469602;179469601;179469600 |
N2A | 15504 | 46735;46736;46737 | chr2:178604875;178604874;178604873 | chr2:179469602;179469601;179469600 |
N2B | 9007 | 27244;27245;27246 | chr2:178604875;178604874;178604873 | chr2:179469602;179469601;179469600 |
Novex-1 | 9132 | 27619;27620;27621 | chr2:178604875;178604874;178604873 | chr2:179469602;179469601;179469600 |
Novex-2 | 9199 | 27820;27821;27822 | chr2:178604875;178604874;178604873 | chr2:179469602;179469601;179469600 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/H | None | None | 1.0 | N | 0.857 | 0.536 | 0.868193264195 | gnomAD-4.0.0 | 1.59502E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86436E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.8839 | likely_pathogenic | 0.9065 | pathogenic | -2.448 | Highly Destabilizing | 0.994 | D | 0.689 | prob.neutral | None | None | None | None | N |
L/C | 0.892 | likely_pathogenic | 0.9003 | pathogenic | -2.064 | Highly Destabilizing | 1.0 | D | 0.787 | deleterious | None | None | None | None | N |
L/D | 0.9991 | likely_pathogenic | 0.9992 | pathogenic | -2.778 | Highly Destabilizing | 1.0 | D | 0.871 | deleterious | None | None | None | None | N |
L/E | 0.995 | likely_pathogenic | 0.9954 | pathogenic | -2.612 | Highly Destabilizing | 1.0 | D | 0.859 | deleterious | None | None | None | None | N |
L/F | 0.5463 | ambiguous | 0.5686 | pathogenic | -1.551 | Destabilizing | 0.999 | D | 0.854 | deleterious | D | 0.528976302 | None | None | N |
L/G | 0.99 | likely_pathogenic | 0.9911 | pathogenic | -2.946 | Highly Destabilizing | 1.0 | D | 0.85 | deleterious | None | None | None | None | N |
L/H | 0.989 | likely_pathogenic | 0.9898 | pathogenic | -2.376 | Highly Destabilizing | 1.0 | D | 0.857 | deleterious | N | 0.515531737 | None | None | N |
L/I | 0.1104 | likely_benign | 0.1245 | benign | -1.039 | Destabilizing | 0.962 | D | 0.716 | prob.delet. | N | 0.471890868 | None | None | N |
L/K | 0.9906 | likely_pathogenic | 0.9919 | pathogenic | -1.837 | Destabilizing | 1.0 | D | 0.84 | deleterious | None | None | None | None | N |
L/M | 0.2813 | likely_benign | 0.2799 | benign | -1.135 | Destabilizing | 0.999 | D | 0.817 | deleterious | None | None | None | None | N |
L/N | 0.994 | likely_pathogenic | 0.9945 | pathogenic | -2.059 | Highly Destabilizing | 1.0 | D | 0.875 | deleterious | None | None | None | None | N |
L/P | 0.8995 | likely_pathogenic | 0.9315 | pathogenic | -1.487 | Destabilizing | 1.0 | D | 0.862 | deleterious | N | 0.46388746 | None | None | N |
L/Q | 0.9843 | likely_pathogenic | 0.985 | pathogenic | -2.027 | Highly Destabilizing | 1.0 | D | 0.868 | deleterious | None | None | None | None | N |
L/R | 0.983 | likely_pathogenic | 0.9845 | pathogenic | -1.482 | Destabilizing | 1.0 | D | 0.855 | deleterious | N | 0.504175432 | None | None | N |
L/S | 0.9881 | likely_pathogenic | 0.9902 | pathogenic | -2.747 | Highly Destabilizing | 0.999 | D | 0.842 | deleterious | None | None | None | None | N |
L/T | 0.869 | likely_pathogenic | 0.881 | pathogenic | -2.439 | Highly Destabilizing | 0.998 | D | 0.813 | deleterious | None | None | None | None | N |
L/V | 0.1222 | likely_benign | 0.1349 | benign | -1.487 | Destabilizing | 0.619 | D | 0.379 | neutral | N | 0.425152927 | None | None | N |
L/W | 0.9543 | likely_pathogenic | 0.9629 | pathogenic | -1.871 | Destabilizing | 1.0 | D | 0.801 | deleterious | None | None | None | None | N |
L/Y | 0.9676 | likely_pathogenic | 0.9736 | pathogenic | -1.598 | Destabilizing | 1.0 | D | 0.829 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.