Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18078 | 54457;54458;54459 | chr2:178604857;178604856;178604855 | chr2:179469584;179469583;179469582 |
N2AB | 16437 | 49534;49535;49536 | chr2:178604857;178604856;178604855 | chr2:179469584;179469583;179469582 |
N2A | 15510 | 46753;46754;46755 | chr2:178604857;178604856;178604855 | chr2:179469584;179469583;179469582 |
N2B | 9013 | 27262;27263;27264 | chr2:178604857;178604856;178604855 | chr2:179469584;179469583;179469582 |
Novex-1 | 9138 | 27637;27638;27639 | chr2:178604857;178604856;178604855 | chr2:179469584;179469583;179469582 |
Novex-2 | 9205 | 27838;27839;27840 | chr2:178604857;178604856;178604855 | chr2:179469584;179469583;179469582 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | None | None | 0.989 | N | 0.467 | 0.328 | 0.317958651998 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 6.33473E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.8733 | likely_pathogenic | 0.8914 | pathogenic | -0.352 | Destabilizing | 0.992 | D | 0.408 | neutral | None | None | None | None | N |
K/C | 0.9313 | likely_pathogenic | 0.9341 | pathogenic | -0.438 | Destabilizing | 1.0 | D | 0.645 | neutral | None | None | None | None | N |
K/D | 0.9504 | likely_pathogenic | 0.9565 | pathogenic | -0.159 | Destabilizing | 0.999 | D | 0.477 | neutral | None | None | None | None | N |
K/E | 0.8011 | likely_pathogenic | 0.8247 | pathogenic | -0.085 | Destabilizing | 0.989 | D | 0.467 | neutral | N | 0.499509039 | None | None | N |
K/F | 0.9712 | likely_pathogenic | 0.9739 | pathogenic | -0.216 | Destabilizing | 0.998 | D | 0.651 | neutral | None | None | None | None | N |
K/G | 0.8848 | likely_pathogenic | 0.8946 | pathogenic | -0.686 | Destabilizing | 0.999 | D | 0.442 | neutral | None | None | None | None | N |
K/H | 0.6091 | likely_pathogenic | 0.6158 | pathogenic | -1.135 | Destabilizing | 1.0 | D | 0.461 | neutral | None | None | None | None | N |
K/I | 0.9266 | likely_pathogenic | 0.9375 | pathogenic | 0.492 | Stabilizing | 0.994 | D | 0.64 | neutral | N | 0.515806643 | None | None | N |
K/L | 0.818 | likely_pathogenic | 0.8246 | pathogenic | 0.492 | Stabilizing | 0.983 | D | 0.407 | neutral | None | None | None | None | N |
K/M | 0.7158 | likely_pathogenic | 0.7325 | pathogenic | 0.457 | Stabilizing | 0.96 | D | 0.385 | neutral | None | None | None | None | N |
K/N | 0.8946 | likely_pathogenic | 0.9036 | pathogenic | -0.269 | Destabilizing | 0.998 | D | 0.441 | neutral | N | 0.457179627 | None | None | N |
K/P | 0.9908 | likely_pathogenic | 0.9908 | pathogenic | 0.242 | Stabilizing | 1.0 | D | 0.487 | neutral | None | None | None | None | N |
K/Q | 0.4419 | ambiguous | 0.4591 | ambiguous | -0.435 | Destabilizing | 0.998 | D | 0.461 | neutral | N | 0.469706207 | None | None | N |
K/R | 0.1135 | likely_benign | 0.1121 | benign | -0.496 | Destabilizing | 0.733 | D | 0.287 | neutral | N | 0.451659164 | None | None | N |
K/S | 0.8631 | likely_pathogenic | 0.8828 | pathogenic | -0.884 | Destabilizing | 0.996 | D | 0.43 | neutral | None | None | None | None | N |
K/T | 0.5356 | ambiguous | 0.5881 | pathogenic | -0.62 | Destabilizing | 0.998 | D | 0.399 | neutral | N | 0.391991998 | None | None | N |
K/V | 0.8643 | likely_pathogenic | 0.8843 | pathogenic | 0.242 | Stabilizing | 0.983 | D | 0.434 | neutral | None | None | None | None | N |
K/W | 0.9583 | likely_pathogenic | 0.9612 | pathogenic | -0.112 | Destabilizing | 1.0 | D | 0.649 | neutral | None | None | None | None | N |
K/Y | 0.932 | likely_pathogenic | 0.9365 | pathogenic | 0.216 | Stabilizing | 1.0 | D | 0.6 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.