Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18080 | 54463;54464;54465 | chr2:178604851;178604850;178604849 | chr2:179469578;179469577;179469576 |
N2AB | 16439 | 49540;49541;49542 | chr2:178604851;178604850;178604849 | chr2:179469578;179469577;179469576 |
N2A | 15512 | 46759;46760;46761 | chr2:178604851;178604850;178604849 | chr2:179469578;179469577;179469576 |
N2B | 9015 | 27268;27269;27270 | chr2:178604851;178604850;178604849 | chr2:179469578;179469577;179469576 |
Novex-1 | 9140 | 27643;27644;27645 | chr2:178604851;178604850;178604849 | chr2:179469578;179469577;179469576 |
Novex-2 | 9207 | 27844;27845;27846 | chr2:178604851;178604850;178604849 | chr2:179469578;179469577;179469576 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs756321267 | -0.129 | 0.581 | N | 0.55 | 0.27 | 0.251116650651 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.91E-06 | 0 |
E/K | rs756321267 | -0.129 | 0.581 | N | 0.55 | 0.27 | 0.251116650651 | gnomAD-4.0.0 | 2.73903E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.59999E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.5311 | ambiguous | 0.4833 | ambiguous | -0.985 | Destabilizing | 0.581 | D | 0.641 | neutral | N | 0.506667085 | None | None | N |
E/C | 0.9763 | likely_pathogenic | 0.9735 | pathogenic | -0.468 | Destabilizing | 0.993 | D | 0.724 | prob.delet. | None | None | None | None | N |
E/D | 0.2085 | likely_benign | 0.2369 | benign | -0.853 | Destabilizing | 0.004 | N | 0.197 | neutral | N | 0.432302612 | None | None | N |
E/F | 0.9692 | likely_pathogenic | 0.9626 | pathogenic | -0.449 | Destabilizing | 0.993 | D | 0.719 | prob.delet. | None | None | None | None | N |
E/G | 0.469 | ambiguous | 0.4317 | ambiguous | -1.313 | Destabilizing | 0.83 | D | 0.683 | prob.neutral | N | 0.496892808 | None | None | N |
E/H | 0.8863 | likely_pathogenic | 0.8725 | pathogenic | -0.582 | Destabilizing | 0.98 | D | 0.666 | neutral | None | None | None | None | N |
E/I | 0.9185 | likely_pathogenic | 0.8853 | pathogenic | -0.098 | Destabilizing | 0.929 | D | 0.741 | deleterious | None | None | None | None | N |
E/K | 0.6806 | likely_pathogenic | 0.637 | pathogenic | -0.46 | Destabilizing | 0.581 | D | 0.55 | neutral | N | 0.495103297 | None | None | N |
E/L | 0.9088 | likely_pathogenic | 0.8811 | pathogenic | -0.098 | Destabilizing | 0.929 | D | 0.735 | prob.delet. | None | None | None | None | N |
E/M | 0.8911 | likely_pathogenic | 0.8612 | pathogenic | 0.295 | Stabilizing | 0.993 | D | 0.675 | neutral | None | None | None | None | N |
E/N | 0.5295 | ambiguous | 0.517 | ambiguous | -0.933 | Destabilizing | 0.764 | D | 0.697 | prob.neutral | None | None | None | None | N |
E/P | 0.9858 | likely_pathogenic | 0.9837 | pathogenic | -0.374 | Destabilizing | 0.929 | D | 0.717 | prob.delet. | None | None | None | None | N |
E/Q | 0.4386 | ambiguous | 0.3991 | ambiguous | -0.839 | Destabilizing | 0.83 | D | 0.663 | neutral | N | 0.500471831 | None | None | N |
E/R | 0.7964 | likely_pathogenic | 0.76 | pathogenic | -0.154 | Destabilizing | 0.866 | D | 0.695 | prob.neutral | None | None | None | None | N |
E/S | 0.5054 | ambiguous | 0.4775 | ambiguous | -1.221 | Destabilizing | 0.48 | N | 0.602 | neutral | None | None | None | None | N |
E/T | 0.6177 | likely_pathogenic | 0.5634 | ambiguous | -0.95 | Destabilizing | 0.866 | D | 0.706 | prob.neutral | None | None | None | None | N |
E/V | 0.7855 | likely_pathogenic | 0.7309 | pathogenic | -0.374 | Destabilizing | 0.908 | D | 0.733 | prob.delet. | N | 0.495562653 | None | None | N |
E/W | 0.9889 | likely_pathogenic | 0.9875 | pathogenic | -0.142 | Destabilizing | 0.993 | D | 0.733 | prob.delet. | None | None | None | None | N |
E/Y | 0.9407 | likely_pathogenic | 0.9312 | pathogenic | -0.185 | Destabilizing | 0.993 | D | 0.712 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.