Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18092 | 54499;54500;54501 | chr2:178604815;178604814;178604813 | chr2:179469542;179469541;179469540 |
N2AB | 16451 | 49576;49577;49578 | chr2:178604815;178604814;178604813 | chr2:179469542;179469541;179469540 |
N2A | 15524 | 46795;46796;46797 | chr2:178604815;178604814;178604813 | chr2:179469542;179469541;179469540 |
N2B | 9027 | 27304;27305;27306 | chr2:178604815;178604814;178604813 | chr2:179469542;179469541;179469540 |
Novex-1 | 9152 | 27679;27680;27681 | chr2:178604815;178604814;178604813 | chr2:179469542;179469541;179469540 |
Novex-2 | 9219 | 27880;27881;27882 | chr2:178604815;178604814;178604813 | chr2:179469542;179469541;179469540 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/D | None | None | 0.031 | N | 0.128 | 0.13 | 0.195762928549 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.5246 | ambiguous | 0.4952 | ambiguous | -0.591 | Destabilizing | 0.97 | D | 0.645 | neutral | None | None | None | None | N |
N/C | 0.6216 | likely_pathogenic | 0.6009 | pathogenic | 0.139 | Stabilizing | 1.0 | D | 0.731 | prob.delet. | None | None | None | None | N |
N/D | 0.0969 | likely_benign | 0.088 | benign | -1.006 | Destabilizing | 0.031 | N | 0.128 | neutral | N | 0.422181619 | None | None | N |
N/E | 0.7585 | likely_pathogenic | 0.7415 | pathogenic | -0.993 | Destabilizing | 0.942 | D | 0.546 | neutral | None | None | None | None | N |
N/F | 0.8703 | likely_pathogenic | 0.8419 | pathogenic | -0.928 | Destabilizing | 0.996 | D | 0.726 | prob.delet. | None | None | None | None | N |
N/G | 0.5594 | ambiguous | 0.5443 | ambiguous | -0.818 | Destabilizing | 0.985 | D | 0.535 | neutral | None | None | None | None | N |
N/H | 0.3822 | ambiguous | 0.3415 | ambiguous | -0.946 | Destabilizing | 0.998 | D | 0.597 | neutral | N | 0.51026475 | None | None | N |
N/I | 0.6518 | likely_pathogenic | 0.5797 | pathogenic | -0.06 | Destabilizing | 0.433 | N | 0.527 | neutral | N | 0.520039027 | None | None | N |
N/K | 0.8322 | likely_pathogenic | 0.7955 | pathogenic | -0.075 | Destabilizing | 0.98 | D | 0.557 | neutral | N | 0.468442269 | None | None | N |
N/L | 0.611 | likely_pathogenic | 0.5579 | ambiguous | -0.06 | Destabilizing | 0.942 | D | 0.689 | prob.neutral | None | None | None | None | N |
N/M | 0.7176 | likely_pathogenic | 0.6699 | pathogenic | 0.662 | Stabilizing | 0.999 | D | 0.703 | prob.neutral | None | None | None | None | N |
N/P | 0.854 | likely_pathogenic | 0.864 | pathogenic | -0.21 | Destabilizing | 0.999 | D | 0.717 | prob.delet. | None | None | None | None | N |
N/Q | 0.7791 | likely_pathogenic | 0.753 | pathogenic | -0.91 | Destabilizing | 0.996 | D | 0.576 | neutral | None | None | None | None | N |
N/R | 0.8293 | likely_pathogenic | 0.7838 | pathogenic | 0.053 | Stabilizing | 0.996 | D | 0.584 | neutral | None | None | None | None | N |
N/S | 0.118 | likely_benign | 0.1134 | benign | -0.523 | Destabilizing | 0.961 | D | 0.553 | neutral | N | 0.498391531 | None | None | N |
N/T | 0.197 | likely_benign | 0.1791 | benign | -0.357 | Destabilizing | 0.98 | D | 0.565 | neutral | N | 0.503682708 | None | None | N |
N/V | 0.6016 | likely_pathogenic | 0.545 | ambiguous | -0.21 | Destabilizing | 0.942 | D | 0.69 | prob.neutral | None | None | None | None | N |
N/W | 0.9635 | likely_pathogenic | 0.9557 | pathogenic | -0.819 | Destabilizing | 1.0 | D | 0.732 | prob.delet. | None | None | None | None | N |
N/Y | 0.5478 | ambiguous | 0.4879 | ambiguous | -0.523 | Destabilizing | 0.998 | D | 0.714 | prob.delet. | N | 0.49532239 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.