Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18095 | 54508;54509;54510 | chr2:178604806;178604805;178604804 | chr2:179469533;179469532;179469531 |
N2AB | 16454 | 49585;49586;49587 | chr2:178604806;178604805;178604804 | chr2:179469533;179469532;179469531 |
N2A | 15527 | 46804;46805;46806 | chr2:178604806;178604805;178604804 | chr2:179469533;179469532;179469531 |
N2B | 9030 | 27313;27314;27315 | chr2:178604806;178604805;178604804 | chr2:179469533;179469532;179469531 |
Novex-1 | 9155 | 27688;27689;27690 | chr2:178604806;178604805;178604804 | chr2:179469533;179469532;179469531 |
Novex-2 | 9222 | 27889;27890;27891 | chr2:178604806;178604805;178604804 | chr2:179469533;179469532;179469531 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/C | rs371747177 | -0.545 | 0.995 | N | 0.629 | 0.347 | None | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 1.66279E-04 |
S/G | None | None | 0.008 | N | 0.364 | 0.117 | 0.107399877778 | gnomAD-4.0.0 | 6.84708E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 1.65837E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.1443 | likely_benign | 0.1539 | benign | -0.841 | Destabilizing | 0.415 | N | 0.604 | neutral | None | None | None | None | I |
S/C | 0.1631 | likely_benign | 0.1784 | benign | -0.53 | Destabilizing | 0.995 | D | 0.629 | neutral | N | 0.521561966 | None | None | I |
S/D | 0.9093 | likely_pathogenic | 0.905 | pathogenic | -0.274 | Destabilizing | 0.775 | D | 0.671 | neutral | None | None | None | None | I |
S/E | 0.9512 | likely_pathogenic | 0.9503 | pathogenic | -0.285 | Destabilizing | 0.875 | D | 0.671 | neutral | None | None | None | None | I |
S/F | 0.8027 | likely_pathogenic | 0.8311 | pathogenic | -1.087 | Destabilizing | 0.987 | D | 0.673 | neutral | None | None | None | None | I |
S/G | 0.2634 | likely_benign | 0.274 | benign | -1.078 | Destabilizing | 0.008 | N | 0.364 | neutral | N | 0.520708243 | None | None | I |
S/H | 0.8752 | likely_pathogenic | 0.8861 | pathogenic | -1.56 | Destabilizing | 0.996 | D | 0.617 | neutral | None | None | None | None | I |
S/I | 0.7816 | likely_pathogenic | 0.7965 | pathogenic | -0.318 | Destabilizing | 0.901 | D | 0.679 | prob.neutral | N | 0.50813718 | None | None | I |
S/K | 0.9892 | likely_pathogenic | 0.9903 | pathogenic | -0.748 | Destabilizing | 0.775 | D | 0.673 | neutral | None | None | None | None | I |
S/L | 0.5011 | ambiguous | 0.5213 | ambiguous | -0.318 | Destabilizing | 0.775 | D | 0.649 | neutral | None | None | None | None | I |
S/M | 0.5417 | ambiguous | 0.5764 | pathogenic | 0.062 | Stabilizing | 0.996 | D | 0.617 | neutral | None | None | None | None | I |
S/N | 0.5986 | likely_pathogenic | 0.6094 | pathogenic | -0.679 | Destabilizing | 0.722 | D | 0.697 | prob.neutral | N | 0.485424569 | None | None | I |
S/P | 0.9926 | likely_pathogenic | 0.9937 | pathogenic | -0.46 | Destabilizing | 0.987 | D | 0.639 | neutral | None | None | None | None | I |
S/Q | 0.9228 | likely_pathogenic | 0.928 | pathogenic | -0.855 | Destabilizing | 0.987 | D | 0.658 | neutral | None | None | None | None | I |
S/R | 0.9814 | likely_pathogenic | 0.983 | pathogenic | -0.622 | Destabilizing | 0.949 | D | 0.631 | neutral | N | 0.517422796 | None | None | I |
S/T | 0.2346 | likely_benign | 0.2483 | benign | -0.721 | Destabilizing | 0.034 | N | 0.441 | neutral | N | 0.485774524 | None | None | I |
S/V | 0.6528 | likely_pathogenic | 0.6728 | pathogenic | -0.46 | Destabilizing | 0.923 | D | 0.661 | neutral | None | None | None | None | I |
S/W | 0.8867 | likely_pathogenic | 0.8995 | pathogenic | -1.034 | Destabilizing | 0.996 | D | 0.742 | deleterious | None | None | None | None | I |
S/Y | 0.7837 | likely_pathogenic | 0.8032 | pathogenic | -0.785 | Destabilizing | 0.987 | D | 0.669 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.