Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18096 | 54511;54512;54513 | chr2:178604803;178604802;178604801 | chr2:179469530;179469529;179469528 |
N2AB | 16455 | 49588;49589;49590 | chr2:178604803;178604802;178604801 | chr2:179469530;179469529;179469528 |
N2A | 15528 | 46807;46808;46809 | chr2:178604803;178604802;178604801 | chr2:179469530;179469529;179469528 |
N2B | 9031 | 27316;27317;27318 | chr2:178604803;178604802;178604801 | chr2:179469530;179469529;179469528 |
Novex-1 | 9156 | 27691;27692;27693 | chr2:178604803;178604802;178604801 | chr2:179469530;179469529;179469528 |
Novex-2 | 9223 | 27892;27893;27894 | chr2:178604803;178604802;178604801 | chr2:179469530;179469529;179469528 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | None | None | 0.998 | N | 0.543 | 0.362 | 0.365120060079 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
E/V | None | None | 1.0 | N | 0.673 | 0.527 | 0.596093875869 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.66327E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2829 | likely_benign | 0.2616 | benign | -0.216 | Destabilizing | 0.998 | D | 0.589 | neutral | N | 0.479405913 | None | None | I |
E/C | 0.9325 | likely_pathogenic | 0.9334 | pathogenic | 0.019 | Stabilizing | 1.0 | D | 0.679 | prob.neutral | None | None | None | None | I |
E/D | 0.1102 | likely_benign | 0.103 | benign | -0.213 | Destabilizing | 0.434 | N | 0.218 | neutral | N | 0.468650201 | None | None | I |
E/F | 0.906 | likely_pathogenic | 0.9073 | pathogenic | -0.135 | Destabilizing | 1.0 | D | 0.647 | neutral | None | None | None | None | I |
E/G | 0.3902 | ambiguous | 0.3609 | ambiguous | -0.388 | Destabilizing | 0.999 | D | 0.596 | neutral | D | 0.525255632 | None | None | I |
E/H | 0.7441 | likely_pathogenic | 0.7208 | pathogenic | 0.202 | Stabilizing | 1.0 | D | 0.652 | neutral | None | None | None | None | I |
E/I | 0.594 | likely_pathogenic | 0.5734 | pathogenic | 0.191 | Stabilizing | 1.0 | D | 0.671 | neutral | None | None | None | None | I |
E/K | 0.4287 | ambiguous | 0.3657 | ambiguous | 0.489 | Stabilizing | 0.998 | D | 0.543 | neutral | N | 0.480501991 | None | None | I |
E/L | 0.6446 | likely_pathogenic | 0.6233 | pathogenic | 0.191 | Stabilizing | 1.0 | D | 0.664 | neutral | None | None | None | None | I |
E/M | 0.6961 | likely_pathogenic | 0.6848 | pathogenic | 0.2 | Stabilizing | 1.0 | D | 0.639 | neutral | None | None | None | None | I |
E/N | 0.3546 | ambiguous | 0.3311 | benign | 0.167 | Stabilizing | 0.999 | D | 0.651 | neutral | None | None | None | None | I |
E/P | 0.5216 | ambiguous | 0.4873 | ambiguous | 0.075 | Stabilizing | 1.0 | D | 0.65 | neutral | None | None | None | None | I |
E/Q | 0.3134 | likely_benign | 0.2849 | benign | 0.205 | Stabilizing | 0.999 | D | 0.603 | neutral | N | 0.510016821 | None | None | I |
E/R | 0.601 | likely_pathogenic | 0.5492 | ambiguous | 0.668 | Stabilizing | 1.0 | D | 0.685 | prob.neutral | None | None | None | None | I |
E/S | 0.3418 | ambiguous | 0.3213 | benign | 0.021 | Stabilizing | 0.997 | D | 0.567 | neutral | None | None | None | None | I |
E/T | 0.4094 | ambiguous | 0.3867 | ambiguous | 0.168 | Stabilizing | 1.0 | D | 0.621 | neutral | None | None | None | None | I |
E/V | 0.3926 | ambiguous | 0.374 | ambiguous | 0.075 | Stabilizing | 1.0 | D | 0.673 | neutral | N | 0.521233892 | None | None | I |
E/W | 0.972 | likely_pathogenic | 0.9695 | pathogenic | -0.015 | Destabilizing | 1.0 | D | 0.691 | prob.neutral | None | None | None | None | I |
E/Y | 0.8298 | likely_pathogenic | 0.8253 | pathogenic | 0.107 | Stabilizing | 1.0 | D | 0.658 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.