Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18097 | 54514;54515;54516 | chr2:178604800;178604799;178604798 | chr2:179469527;179469526;179469525 |
N2AB | 16456 | 49591;49592;49593 | chr2:178604800;178604799;178604798 | chr2:179469527;179469526;179469525 |
N2A | 15529 | 46810;46811;46812 | chr2:178604800;178604799;178604798 | chr2:179469527;179469526;179469525 |
N2B | 9032 | 27319;27320;27321 | chr2:178604800;178604799;178604798 | chr2:179469527;179469526;179469525 |
Novex-1 | 9157 | 27694;27695;27696 | chr2:178604800;178604799;178604798 | chr2:179469527;179469526;179469525 |
Novex-2 | 9224 | 27895;27896;27897 | chr2:178604800;178604799;178604798 | chr2:179469527;179469526;179469525 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/T | rs1553681465 | None | 0.98 | N | 0.701 | 0.521 | 0.720158938049 | gnomAD-4.0.0 | 2.05417E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79998E-06 | 0 | 1.65826E-05 |
I/V | None | None | 0.689 | N | 0.369 | 0.154 | 0.567351761699 | gnomAD-4.0.0 | 3.60097E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.9375E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.9786 | likely_pathogenic | 0.9831 | pathogenic | -2.422 | Highly Destabilizing | 0.965 | D | 0.595 | neutral | None | None | None | None | I |
I/C | 0.9786 | likely_pathogenic | 0.9825 | pathogenic | -1.481 | Destabilizing | 1.0 | D | 0.691 | prob.neutral | None | None | None | None | I |
I/D | 0.9978 | likely_pathogenic | 0.9984 | pathogenic | -2.462 | Highly Destabilizing | 0.999 | D | 0.777 | deleterious | None | None | None | None | I |
I/E | 0.9931 | likely_pathogenic | 0.9945 | pathogenic | -2.379 | Highly Destabilizing | 0.999 | D | 0.77 | deleterious | None | None | None | None | I |
I/F | 0.8937 | likely_pathogenic | 0.9244 | pathogenic | -1.687 | Destabilizing | 0.989 | D | 0.677 | prob.neutral | N | 0.516965952 | None | None | I |
I/G | 0.9961 | likely_pathogenic | 0.9967 | pathogenic | -2.847 | Highly Destabilizing | 0.999 | D | 0.763 | deleterious | None | None | None | None | I |
I/H | 0.9954 | likely_pathogenic | 0.9969 | pathogenic | -2.151 | Highly Destabilizing | 1.0 | D | 0.76 | deleterious | None | None | None | None | I |
I/K | 0.9866 | likely_pathogenic | 0.9891 | pathogenic | -1.835 | Destabilizing | 0.999 | D | 0.764 | deleterious | None | None | None | None | I |
I/L | 0.2963 | likely_benign | 0.3293 | benign | -1.254 | Destabilizing | 0.011 | N | 0.178 | neutral | N | 0.497802459 | None | None | I |
I/M | 0.4166 | ambiguous | 0.4803 | ambiguous | -0.87 | Destabilizing | 0.989 | D | 0.682 | prob.neutral | D | 0.530857153 | None | None | I |
I/N | 0.9569 | likely_pathogenic | 0.9658 | pathogenic | -1.795 | Destabilizing | 0.998 | D | 0.787 | deleterious | N | 0.520514806 | None | None | I |
I/P | 0.9658 | likely_pathogenic | 0.9728 | pathogenic | -1.619 | Destabilizing | 0.999 | D | 0.789 | deleterious | None | None | None | None | I |
I/Q | 0.991 | likely_pathogenic | 0.9934 | pathogenic | -1.901 | Destabilizing | 0.999 | D | 0.793 | deleterious | None | None | None | None | I |
I/R | 0.9873 | likely_pathogenic | 0.9894 | pathogenic | -1.225 | Destabilizing | 0.999 | D | 0.783 | deleterious | None | None | None | None | I |
I/S | 0.9861 | likely_pathogenic | 0.9885 | pathogenic | -2.419 | Highly Destabilizing | 0.998 | D | 0.725 | prob.delet. | D | 0.531110643 | None | None | I |
I/T | 0.9563 | likely_pathogenic | 0.9661 | pathogenic | -2.215 | Highly Destabilizing | 0.98 | D | 0.701 | prob.neutral | N | 0.513170972 | None | None | I |
I/V | 0.1559 | likely_benign | 0.1589 | benign | -1.619 | Destabilizing | 0.689 | D | 0.369 | neutral | N | 0.492895285 | None | None | I |
I/W | 0.9956 | likely_pathogenic | 0.9975 | pathogenic | -1.928 | Destabilizing | 1.0 | D | 0.772 | deleterious | None | None | None | None | I |
I/Y | 0.9826 | likely_pathogenic | 0.9877 | pathogenic | -1.715 | Destabilizing | 0.999 | D | 0.736 | prob.delet. | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.