Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18099 | 54520;54521;54522 | chr2:178604794;178604793;178604792 | chr2:179469521;179469520;179469519 |
N2AB | 16458 | 49597;49598;49599 | chr2:178604794;178604793;178604792 | chr2:179469521;179469520;179469519 |
N2A | 15531 | 46816;46817;46818 | chr2:178604794;178604793;178604792 | chr2:179469521;179469520;179469519 |
N2B | 9034 | 27325;27326;27327 | chr2:178604794;178604793;178604792 | chr2:179469521;179469520;179469519 |
Novex-1 | 9159 | 27700;27701;27702 | chr2:178604794;178604793;178604792 | chr2:179469521;179469520;179469519 |
Novex-2 | 9226 | 27901;27902;27903 | chr2:178604794;178604793;178604792 | chr2:179469521;179469520;179469519 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/Q | rs750814326 | -0.438 | 0.891 | N | 0.564 | 0.226 | 0.231231049324 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
H/Q | rs750814326 | -0.438 | 0.891 | N | 0.564 | 0.226 | 0.231231049324 | gnomAD-4.0.0 | 6.84721E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.16036E-05 | 0 |
H/Y | None | None | 0.961 | N | 0.546 | 0.32 | 0.335661160332 | gnomAD-4.0.0 | 1.59407E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86367E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.6182 | likely_pathogenic | 0.6748 | pathogenic | -1.142 | Destabilizing | 0.842 | D | 0.559 | neutral | None | None | None | None | N |
H/C | 0.2473 | likely_benign | 0.2623 | benign | -0.41 | Destabilizing | 0.998 | D | 0.619 | neutral | None | None | None | None | N |
H/D | 0.6596 | likely_pathogenic | 0.6772 | pathogenic | -0.806 | Destabilizing | 0.454 | N | 0.497 | neutral | N | 0.430822532 | None | None | N |
H/E | 0.8179 | likely_pathogenic | 0.8278 | pathogenic | -0.687 | Destabilizing | 0.688 | D | 0.507 | neutral | None | None | None | None | N |
H/F | 0.557 | ambiguous | 0.5902 | pathogenic | 0.14 | Stabilizing | 0.991 | D | 0.597 | neutral | None | None | None | None | N |
H/G | 0.4786 | ambiguous | 0.5285 | ambiguous | -1.508 | Destabilizing | 0.525 | D | 0.477 | neutral | None | None | None | None | N |
H/I | 0.9041 | likely_pathogenic | 0.929 | pathogenic | -0.116 | Destabilizing | 0.991 | D | 0.627 | neutral | None | None | None | None | N |
H/K | 0.7957 | likely_pathogenic | 0.797 | pathogenic | -0.881 | Destabilizing | 0.842 | D | 0.515 | neutral | None | None | None | None | N |
H/L | 0.5499 | ambiguous | 0.6267 | pathogenic | -0.116 | Destabilizing | 0.891 | D | 0.623 | neutral | N | 0.473535946 | None | None | N |
H/M | 0.844 | likely_pathogenic | 0.8779 | pathogenic | -0.273 | Destabilizing | 0.998 | D | 0.588 | neutral | None | None | None | None | N |
H/N | 0.138 | likely_benign | 0.1683 | benign | -1.02 | Destabilizing | 0.002 | N | 0.143 | neutral | N | 0.368984639 | None | None | N |
H/P | 0.9762 | likely_pathogenic | 0.9824 | pathogenic | -0.44 | Destabilizing | 0.989 | D | 0.629 | neutral | N | 0.46668475 | None | None | N |
H/Q | 0.5651 | likely_pathogenic | 0.5813 | pathogenic | -0.739 | Destabilizing | 0.891 | D | 0.564 | neutral | N | 0.456315622 | None | None | N |
H/R | 0.4742 | ambiguous | 0.4416 | ambiguous | -1.169 | Destabilizing | 0.801 | D | 0.477 | neutral | N | 0.442519606 | None | None | N |
H/S | 0.3259 | likely_benign | 0.3687 | ambiguous | -1.147 | Destabilizing | 0.525 | D | 0.469 | neutral | None | None | None | None | N |
H/T | 0.6526 | likely_pathogenic | 0.6967 | pathogenic | -0.929 | Destabilizing | 0.842 | D | 0.582 | neutral | None | None | None | None | N |
H/V | 0.8349 | likely_pathogenic | 0.8652 | pathogenic | -0.44 | Destabilizing | 0.974 | D | 0.639 | neutral | None | None | None | None | N |
H/W | 0.6864 | likely_pathogenic | 0.6774 | pathogenic | 0.467 | Stabilizing | 0.998 | D | 0.623 | neutral | None | None | None | None | N |
H/Y | 0.1697 | likely_benign | 0.1745 | benign | 0.557 | Stabilizing | 0.961 | D | 0.546 | neutral | N | 0.434670914 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.