Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18103 | 54532;54533;54534 | chr2:178604782;178604781;178604780 | chr2:179469509;179469508;179469507 |
N2AB | 16462 | 49609;49610;49611 | chr2:178604782;178604781;178604780 | chr2:179469509;179469508;179469507 |
N2A | 15535 | 46828;46829;46830 | chr2:178604782;178604781;178604780 | chr2:179469509;179469508;179469507 |
N2B | 9038 | 27337;27338;27339 | chr2:178604782;178604781;178604780 | chr2:179469509;179469508;179469507 |
Novex-1 | 9163 | 27712;27713;27714 | chr2:178604782;178604781;178604780 | chr2:179469509;179469508;179469507 |
Novex-2 | 9230 | 27913;27914;27915 | chr2:178604782;178604781;178604780 | chr2:179469509;179469508;179469507 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/G | None | None | 0.939 | N | 0.712 | 0.461 | 0.242244723065 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.66327E-05 |
D/N | rs1193175329 | None | 0.939 | N | 0.702 | 0.265 | 0.215109475489 | gnomAD-4.0.0 | 1.36959E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.80013E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.5715 | likely_pathogenic | 0.5603 | ambiguous | -1.959 | Destabilizing | 0.939 | D | 0.71 | prob.delet. | N | 0.466108541 | None | None | N |
D/C | 0.8537 | likely_pathogenic | 0.8436 | pathogenic | -0.908 | Destabilizing | 0.999 | D | 0.781 | deleterious | None | None | None | None | N |
D/E | 0.267 | likely_benign | 0.2844 | benign | -1.083 | Destabilizing | 0.02 | N | 0.373 | neutral | N | 0.302047571 | None | None | N |
D/F | 0.8163 | likely_pathogenic | 0.8372 | pathogenic | -1.796 | Destabilizing | 0.998 | D | 0.807 | deleterious | None | None | None | None | N |
D/G | 0.6661 | likely_pathogenic | 0.7001 | pathogenic | -2.304 | Highly Destabilizing | 0.939 | D | 0.712 | prob.delet. | N | 0.491833705 | None | None | N |
D/H | 0.6686 | likely_pathogenic | 0.6766 | pathogenic | -1.488 | Destabilizing | 0.998 | D | 0.75 | deleterious | N | 0.49131363 | None | None | N |
D/I | 0.8302 | likely_pathogenic | 0.8316 | pathogenic | -0.974 | Destabilizing | 0.993 | D | 0.819 | deleterious | None | None | None | None | N |
D/K | 0.9068 | likely_pathogenic | 0.9173 | pathogenic | -1.668 | Destabilizing | 0.91 | D | 0.697 | prob.neutral | None | None | None | None | N |
D/L | 0.7723 | likely_pathogenic | 0.7675 | pathogenic | -0.974 | Destabilizing | 0.986 | D | 0.781 | deleterious | None | None | None | None | N |
D/M | 0.8872 | likely_pathogenic | 0.8938 | pathogenic | -0.232 | Destabilizing | 0.999 | D | 0.791 | deleterious | None | None | None | None | N |
D/N | 0.3727 | ambiguous | 0.39 | ambiguous | -1.74 | Destabilizing | 0.939 | D | 0.702 | prob.neutral | N | 0.480885993 | None | None | N |
D/P | 0.9981 | likely_pathogenic | 0.9981 | pathogenic | -1.289 | Destabilizing | 0.993 | D | 0.732 | prob.delet. | None | None | None | None | N |
D/Q | 0.666 | likely_pathogenic | 0.6801 | pathogenic | -1.461 | Destabilizing | 0.973 | D | 0.734 | prob.delet. | None | None | None | None | N |
D/R | 0.9061 | likely_pathogenic | 0.9176 | pathogenic | -1.502 | Destabilizing | 0.986 | D | 0.731 | prob.delet. | None | None | None | None | N |
D/S | 0.3799 | ambiguous | 0.3863 | ambiguous | -2.413 | Highly Destabilizing | 0.953 | D | 0.671 | neutral | None | None | None | None | N |
D/T | 0.6763 | likely_pathogenic | 0.6979 | pathogenic | -2.071 | Highly Destabilizing | 0.986 | D | 0.731 | prob.delet. | None | None | None | None | N |
D/V | 0.6649 | likely_pathogenic | 0.6635 | pathogenic | -1.289 | Destabilizing | 0.991 | D | 0.777 | deleterious | N | 0.491140272 | None | None | N |
D/W | 0.9607 | likely_pathogenic | 0.9649 | pathogenic | -1.881 | Destabilizing | 0.999 | D | 0.769 | deleterious | None | None | None | None | N |
D/Y | 0.5799 | likely_pathogenic | 0.6056 | pathogenic | -1.631 | Destabilizing | 0.997 | D | 0.809 | deleterious | N | 0.432670758 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.