Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18111 | 54556;54557;54558 | chr2:178604758;178604757;178604756 | chr2:179469485;179469484;179469483 |
N2AB | 16470 | 49633;49634;49635 | chr2:178604758;178604757;178604756 | chr2:179469485;179469484;179469483 |
N2A | 15543 | 46852;46853;46854 | chr2:178604758;178604757;178604756 | chr2:179469485;179469484;179469483 |
N2B | 9046 | 27361;27362;27363 | chr2:178604758;178604757;178604756 | chr2:179469485;179469484;179469483 |
Novex-1 | 9171 | 27736;27737;27738 | chr2:178604758;178604757;178604756 | chr2:179469485;179469484;179469483 |
Novex-2 | 9238 | 27937;27938;27939 | chr2:178604758;178604757;178604756 | chr2:179469485;179469484;179469483 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/T | rs2054379596 | None | 0.117 | N | 0.313 | 0.116 | 0.221019684889 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
K/T | rs2054379596 | None | 0.117 | N | 0.313 | 0.116 | 0.221019684889 | gnomAD-4.0.0 | 6.57877E-06 | None | None | None | None | N | None | 2.41289E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.4654 | ambiguous | 0.3388 | benign | -0.064 | Destabilizing | 0.067 | N | 0.349 | neutral | None | None | None | None | N |
K/C | 0.8329 | likely_pathogenic | 0.7472 | pathogenic | -0.581 | Destabilizing | 0.935 | D | 0.386 | neutral | None | None | None | None | N |
K/D | 0.5842 | likely_pathogenic | 0.5125 | ambiguous | -0.457 | Destabilizing | 0.149 | N | 0.31 | neutral | None | None | None | None | N |
K/E | 0.4061 | ambiguous | 0.3085 | benign | -0.48 | Destabilizing | 0.062 | N | 0.363 | neutral | N | 0.457718345 | None | None | N |
K/F | 0.8307 | likely_pathogenic | 0.752 | pathogenic | -0.458 | Destabilizing | 0.555 | D | 0.342 | neutral | None | None | None | None | N |
K/G | 0.4349 | ambiguous | 0.3484 | ambiguous | -0.155 | Destabilizing | None | N | 0.233 | neutral | None | None | None | None | N |
K/H | 0.3927 | ambiguous | 0.326 | benign | -0.2 | Destabilizing | 0.555 | D | 0.299 | neutral | None | None | None | None | N |
K/I | 0.5484 | ambiguous | 0.4334 | ambiguous | 0.094 | Stabilizing | 0.484 | N | 0.339 | neutral | N | 0.473952905 | None | None | N |
K/L | 0.5104 | ambiguous | 0.3798 | ambiguous | 0.094 | Stabilizing | 0.149 | N | 0.335 | neutral | None | None | None | None | N |
K/M | 0.4071 | ambiguous | 0.3017 | benign | -0.281 | Destabilizing | 0.935 | D | 0.301 | neutral | None | None | None | None | N |
K/N | 0.4447 | ambiguous | 0.366 | ambiguous | -0.125 | Destabilizing | 0.117 | N | 0.308 | neutral | N | 0.462222874 | None | None | N |
K/P | 0.667 | likely_pathogenic | 0.5492 | ambiguous | 0.062 | Stabilizing | 0.555 | D | 0.309 | neutral | None | None | None | None | N |
K/Q | 0.2428 | likely_benign | 0.1912 | benign | -0.259 | Destabilizing | 0.317 | N | 0.297 | neutral | N | 0.492583067 | None | None | N |
K/R | 0.1001 | likely_benign | 0.0878 | benign | -0.215 | Destabilizing | None | N | 0.25 | neutral | N | 0.452083238 | None | None | N |
K/S | 0.5205 | ambiguous | 0.4087 | ambiguous | -0.443 | Destabilizing | 0.149 | N | 0.337 | neutral | None | None | None | None | N |
K/T | 0.2788 | likely_benign | 0.1998 | benign | -0.369 | Destabilizing | 0.117 | N | 0.313 | neutral | N | 0.414815716 | None | None | N |
K/V | 0.4786 | ambiguous | 0.3686 | ambiguous | 0.062 | Stabilizing | 0.38 | N | 0.331 | neutral | None | None | None | None | N |
K/W | 0.816 | likely_pathogenic | 0.7506 | pathogenic | -0.585 | Destabilizing | 0.935 | D | 0.445 | neutral | None | None | None | None | N |
K/Y | 0.6789 | likely_pathogenic | 0.6058 | pathogenic | -0.25 | Destabilizing | 0.555 | D | 0.335 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.