Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18112 | 54559;54560;54561 | chr2:178604755;178604754;178604753 | chr2:179469482;179469481;179469480 |
N2AB | 16471 | 49636;49637;49638 | chr2:178604755;178604754;178604753 | chr2:179469482;179469481;179469480 |
N2A | 15544 | 46855;46856;46857 | chr2:178604755;178604754;178604753 | chr2:179469482;179469481;179469480 |
N2B | 9047 | 27364;27365;27366 | chr2:178604755;178604754;178604753 | chr2:179469482;179469481;179469480 |
Novex-1 | 9172 | 27739;27740;27741 | chr2:178604755;178604754;178604753 | chr2:179469482;179469481;179469480 |
Novex-2 | 9239 | 27940;27941;27942 | chr2:178604755;178604754;178604753 | chr2:179469482;179469481;179469480 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/G | None | None | 0.012 | N | 0.303 | 0.081 | 0.0666544352282 | gnomAD-4.0.0 | 1.59546E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86571E-06 | 0 | 0 |
A/T | None | None | None | N | 0.212 | 0.065 | 0.0611884634855 | gnomAD-4.0.0 | 1.36986E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.80033E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.3521 | ambiguous | 0.322 | benign | -0.738 | Destabilizing | 0.356 | N | 0.293 | neutral | None | None | None | None | N |
A/D | 0.2965 | likely_benign | 0.3093 | benign | -1.177 | Destabilizing | 0.016 | N | 0.399 | neutral | None | None | None | None | N |
A/E | 0.3206 | likely_benign | 0.3191 | benign | -1.288 | Destabilizing | 0.012 | N | 0.358 | neutral | N | 0.419909318 | None | None | N |
A/F | 0.3789 | ambiguous | 0.3908 | ambiguous | -1.26 | Destabilizing | 0.072 | N | 0.469 | neutral | None | None | None | None | N |
A/G | 0.1116 | likely_benign | 0.1055 | benign | -1.069 | Destabilizing | 0.012 | N | 0.303 | neutral | N | 0.376331899 | None | None | N |
A/H | 0.4723 | ambiguous | 0.4876 | ambiguous | -1.233 | Destabilizing | 0.356 | N | 0.445 | neutral | None | None | None | None | N |
A/I | 0.2728 | likely_benign | 0.275 | benign | -0.656 | Destabilizing | None | N | 0.295 | neutral | None | None | None | None | N |
A/K | 0.5697 | likely_pathogenic | 0.593 | pathogenic | -1.22 | Destabilizing | 0.016 | N | 0.355 | neutral | None | None | None | None | N |
A/L | 0.1818 | likely_benign | 0.1829 | benign | -0.656 | Destabilizing | 0.002 | N | 0.341 | neutral | None | None | None | None | N |
A/M | 0.1993 | likely_benign | 0.2057 | benign | -0.43 | Destabilizing | 0.214 | N | 0.341 | neutral | None | None | None | None | N |
A/N | 0.1907 | likely_benign | 0.2125 | benign | -0.735 | Destabilizing | 0.038 | N | 0.395 | neutral | None | None | None | None | N |
A/P | 0.2582 | likely_benign | 0.2299 | benign | -0.704 | Destabilizing | 0.055 | N | 0.347 | neutral | N | 0.440343305 | None | None | N |
A/Q | 0.3736 | ambiguous | 0.3887 | ambiguous | -1.024 | Destabilizing | 0.072 | N | 0.37 | neutral | None | None | None | None | N |
A/R | 0.5676 | likely_pathogenic | 0.5776 | pathogenic | -0.727 | Destabilizing | 0.072 | N | 0.375 | neutral | None | None | None | None | N |
A/S | 0.0714 | likely_benign | 0.0716 | benign | -0.961 | Destabilizing | None | N | 0.21 | neutral | N | 0.384065948 | None | None | N |
A/T | 0.0777 | likely_benign | 0.0806 | benign | -1.003 | Destabilizing | None | N | 0.212 | neutral | N | 0.437399001 | None | None | N |
A/V | 0.1482 | likely_benign | 0.141 | benign | -0.704 | Destabilizing | None | N | 0.211 | neutral | N | 0.447999996 | None | None | N |
A/W | 0.6542 | likely_pathogenic | 0.6352 | pathogenic | -1.463 | Destabilizing | 0.864 | D | 0.435 | neutral | None | None | None | None | N |
A/Y | 0.4216 | ambiguous | 0.4182 | ambiguous | -1.147 | Destabilizing | 0.356 | N | 0.467 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.