Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18115 | 54568;54569;54570 | chr2:178604746;178604745;178604744 | chr2:179469473;179469472;179469471 |
N2AB | 16474 | 49645;49646;49647 | chr2:178604746;178604745;178604744 | chr2:179469473;179469472;179469471 |
N2A | 15547 | 46864;46865;46866 | chr2:178604746;178604745;178604744 | chr2:179469473;179469472;179469471 |
N2B | 9050 | 27373;27374;27375 | chr2:178604746;178604745;178604744 | chr2:179469473;179469472;179469471 |
Novex-1 | 9175 | 27748;27749;27750 | chr2:178604746;178604745;178604744 | chr2:179469473;179469472;179469471 |
Novex-2 | 9242 | 27949;27950;27951 | chr2:178604746;178604745;178604744 | chr2:179469473;179469472;179469471 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | None | None | 0.996 | N | 0.497 | 0.132 | 0.185906805712 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
E/K | rs2054377809 | None | 0.996 | N | 0.527 | 0.304 | 0.255777322467 | gnomAD-4.0.0 | 1.59571E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86633E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.3297 | likely_benign | 0.3011 | benign | -0.671 | Destabilizing | 0.978 | D | 0.523 | neutral | N | 0.477266897 | None | None | N |
E/C | 0.9133 | likely_pathogenic | 0.9055 | pathogenic | -0.274 | Destabilizing | 1.0 | D | 0.696 | prob.neutral | None | None | None | None | N |
E/D | 0.2305 | likely_benign | 0.2366 | benign | -0.656 | Destabilizing | 0.996 | D | 0.497 | neutral | N | 0.476882895 | None | None | N |
E/F | 0.8856 | likely_pathogenic | 0.8684 | pathogenic | -0.368 | Destabilizing | 0.998 | D | 0.685 | prob.neutral | None | None | None | None | N |
E/G | 0.4363 | ambiguous | 0.4122 | ambiguous | -0.931 | Destabilizing | 0.999 | D | 0.565 | neutral | N | 0.512496979 | None | None | N |
E/H | 0.7106 | likely_pathogenic | 0.6691 | pathogenic | -0.315 | Destabilizing | 1.0 | D | 0.57 | neutral | None | None | None | None | N |
E/I | 0.4196 | ambiguous | 0.3942 | ambiguous | 0.006 | Stabilizing | 0.967 | D | 0.581 | neutral | None | None | None | None | N |
E/K | 0.3843 | ambiguous | 0.3113 | benign | -0.11 | Destabilizing | 0.996 | D | 0.527 | neutral | N | 0.443903685 | None | None | N |
E/L | 0.5473 | ambiguous | 0.4999 | ambiguous | 0.006 | Stabilizing | 0.967 | D | 0.555 | neutral | None | None | None | None | N |
E/M | 0.5785 | likely_pathogenic | 0.5462 | ambiguous | 0.208 | Stabilizing | 0.999 | D | 0.659 | neutral | None | None | None | None | N |
E/N | 0.464 | ambiguous | 0.471 | ambiguous | -0.495 | Destabilizing | 0.999 | D | 0.583 | neutral | None | None | None | None | N |
E/P | 0.9831 | likely_pathogenic | 0.9777 | pathogenic | -0.199 | Destabilizing | 0.999 | D | 0.643 | neutral | None | None | None | None | N |
E/Q | 0.226 | likely_benign | 0.2038 | benign | -0.434 | Destabilizing | 0.999 | D | 0.563 | neutral | N | 0.445789197 | None | None | N |
E/R | 0.5709 | likely_pathogenic | 0.4896 | ambiguous | 0.172 | Stabilizing | 0.999 | D | 0.583 | neutral | None | None | None | None | N |
E/S | 0.404 | ambiguous | 0.4061 | ambiguous | -0.69 | Destabilizing | 0.992 | D | 0.529 | neutral | None | None | None | None | N |
E/T | 0.3077 | likely_benign | 0.3058 | benign | -0.482 | Destabilizing | 0.983 | D | 0.569 | neutral | None | None | None | None | N |
E/V | 0.2654 | likely_benign | 0.2368 | benign | -0.199 | Destabilizing | 0.37 | N | 0.325 | neutral | N | 0.428704946 | None | None | N |
E/W | 0.967 | likely_pathogenic | 0.9567 | pathogenic | -0.148 | Destabilizing | 1.0 | D | 0.704 | prob.neutral | None | None | None | None | N |
E/Y | 0.8308 | likely_pathogenic | 0.8012 | pathogenic | -0.123 | Destabilizing | 0.999 | D | 0.662 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.