Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18116 | 54571;54572;54573 | chr2:178604743;178604742;178604741 | chr2:179469470;179469469;179469468 |
N2AB | 16475 | 49648;49649;49650 | chr2:178604743;178604742;178604741 | chr2:179469470;179469469;179469468 |
N2A | 15548 | 46867;46868;46869 | chr2:178604743;178604742;178604741 | chr2:179469470;179469469;179469468 |
N2B | 9051 | 27376;27377;27378 | chr2:178604743;178604742;178604741 | chr2:179469470;179469469;179469468 |
Novex-1 | 9176 | 27751;27752;27753 | chr2:178604743;178604742;178604741 | chr2:179469470;179469469;179469468 |
Novex-2 | 9243 | 27952;27953;27954 | chr2:178604743;178604742;178604741 | chr2:179469470;179469469;179469468 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | rs773746281 | -0.804 | 0.978 | N | 0.46 | 0.199 | 0.303781844768 | gnomAD-2.1.1 | 1.61E-05 | None | None | None | None | N | None | 1.2955E-04 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.89E-06 | 1.66113E-04 |
E/D | rs773746281 | -0.804 | 0.978 | N | 0.46 | 0.199 | 0.303781844768 | gnomAD-3.1.2 | 3.29E-05 | None | None | None | None | N | None | 1.20709E-04 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/D | rs773746281 | -0.804 | 0.978 | N | 0.46 | 0.199 | 0.303781844768 | gnomAD-4.0.0 | 7.4456E-06 | None | None | None | None | N | None | 9.35804E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 3.39364E-06 | 0 | 1.60411E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1561 | likely_benign | 0.16 | benign | -0.662 | Destabilizing | 0.978 | D | 0.513 | neutral | N | 0.445314769 | None | None | N |
E/C | 0.8181 | likely_pathogenic | 0.8402 | pathogenic | -0.19 | Destabilizing | 1.0 | D | 0.721 | prob.delet. | None | None | None | None | N |
E/D | 0.2829 | likely_benign | 0.2978 | benign | -0.805 | Destabilizing | 0.978 | D | 0.46 | neutral | N | 0.454646328 | None | None | N |
E/F | 0.8001 | likely_pathogenic | 0.8227 | pathogenic | -0.555 | Destabilizing | 0.998 | D | 0.739 | prob.delet. | None | None | None | None | N |
E/G | 0.2856 | likely_benign | 0.3294 | benign | -0.922 | Destabilizing | 0.997 | D | 0.623 | neutral | N | 0.476715111 | None | None | N |
E/H | 0.6744 | likely_pathogenic | 0.691 | pathogenic | -0.661 | Destabilizing | 0.999 | D | 0.615 | neutral | None | None | None | None | N |
E/I | 0.278 | likely_benign | 0.2881 | benign | 0.013 | Stabilizing | 0.99 | D | 0.667 | neutral | None | None | None | None | N |
E/K | 0.2476 | likely_benign | 0.2656 | benign | -0.19 | Destabilizing | 0.956 | D | 0.473 | neutral | N | 0.420629755 | None | None | N |
E/L | 0.3471 | ambiguous | 0.3697 | ambiguous | 0.013 | Stabilizing | 0.967 | D | 0.621 | neutral | None | None | None | None | N |
E/M | 0.3719 | ambiguous | 0.3906 | ambiguous | 0.346 | Stabilizing | 0.999 | D | 0.721 | prob.delet. | None | None | None | None | N |
E/N | 0.3576 | ambiguous | 0.3889 | ambiguous | -0.48 | Destabilizing | 0.998 | D | 0.596 | neutral | None | None | None | None | N |
E/P | 0.4037 | ambiguous | 0.4214 | ambiguous | -0.191 | Destabilizing | 0.999 | D | 0.707 | prob.neutral | None | None | None | None | N |
E/Q | 0.1816 | likely_benign | 0.1904 | benign | -0.443 | Destabilizing | 0.798 | D | 0.339 | neutral | N | 0.41022076 | None | None | N |
E/R | 0.4011 | ambiguous | 0.4189 | ambiguous | -0.004 | Destabilizing | 0.995 | D | 0.587 | neutral | None | None | None | None | N |
E/S | 0.3067 | likely_benign | 0.3387 | benign | -0.695 | Destabilizing | 0.983 | D | 0.529 | neutral | None | None | None | None | N |
E/T | 0.229 | likely_benign | 0.2467 | benign | -0.493 | Destabilizing | 0.983 | D | 0.625 | neutral | None | None | None | None | N |
E/V | 0.1613 | likely_benign | 0.1589 | benign | -0.191 | Destabilizing | 0.576 | D | 0.397 | neutral | N | 0.41964832 | None | None | N |
E/W | 0.948 | likely_pathogenic | 0.9472 | pathogenic | -0.407 | Destabilizing | 1.0 | D | 0.697 | prob.neutral | None | None | None | None | N |
E/Y | 0.743 | likely_pathogenic | 0.7607 | pathogenic | -0.327 | Destabilizing | 0.999 | D | 0.738 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.