Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18118 | 54577;54578;54579 | chr2:178604737;178604736;178604735 | chr2:179469464;179469463;179469462 |
N2AB | 16477 | 49654;49655;49656 | chr2:178604737;178604736;178604735 | chr2:179469464;179469463;179469462 |
N2A | 15550 | 46873;46874;46875 | chr2:178604737;178604736;178604735 | chr2:179469464;179469463;179469462 |
N2B | 9053 | 27382;27383;27384 | chr2:178604737;178604736;178604735 | chr2:179469464;179469463;179469462 |
Novex-1 | 9178 | 27757;27758;27759 | chr2:178604737;178604736;178604735 | chr2:179469464;179469463;179469462 |
Novex-2 | 9245 | 27958;27959;27960 | chr2:178604737;178604736;178604735 | chr2:179469464;179469463;179469462 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | None | None | 0.76 | N | 0.528 | 0.168 | 0.21737058555 | gnomAD-4.0.0 | 1.59636E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 2.42248E-04 | 0 | 0 | 0 |
T/I | rs373881551 | None | 0.991 | N | 0.757 | 0.42 | None | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1385 | likely_benign | 0.167 | benign | -1.09 | Destabilizing | 0.76 | D | 0.528 | neutral | N | 0.458723996 | None | None | N |
T/C | 0.4438 | ambiguous | 0.5104 | ambiguous | -0.679 | Destabilizing | 0.999 | D | 0.741 | deleterious | None | None | None | None | N |
T/D | 0.6466 | likely_pathogenic | 0.6971 | pathogenic | -0.474 | Destabilizing | 0.986 | D | 0.709 | prob.delet. | None | None | None | None | N |
T/E | 0.6877 | likely_pathogenic | 0.7631 | pathogenic | -0.412 | Destabilizing | 0.986 | D | 0.711 | prob.delet. | None | None | None | None | N |
T/F | 0.6278 | likely_pathogenic | 0.7579 | pathogenic | -1.077 | Destabilizing | 0.998 | D | 0.753 | deleterious | None | None | None | None | N |
T/G | 0.3296 | likely_benign | 0.3948 | ambiguous | -1.405 | Destabilizing | 0.91 | D | 0.627 | neutral | None | None | None | None | N |
T/H | 0.5696 | likely_pathogenic | 0.6651 | pathogenic | -1.625 | Destabilizing | 0.999 | D | 0.759 | deleterious | None | None | None | None | N |
T/I | 0.5042 | ambiguous | 0.6784 | pathogenic | -0.321 | Destabilizing | 0.991 | D | 0.757 | deleterious | N | 0.509920821 | None | None | N |
T/K | 0.6216 | likely_pathogenic | 0.7371 | pathogenic | -0.737 | Destabilizing | 0.986 | D | 0.715 | prob.delet. | None | None | None | None | N |
T/L | 0.2632 | likely_benign | 0.3551 | ambiguous | -0.321 | Destabilizing | 0.953 | D | 0.627 | neutral | None | None | None | None | N |
T/M | 0.1913 | likely_benign | 0.2314 | benign | -0.068 | Destabilizing | 0.999 | D | 0.747 | deleterious | None | None | None | None | N |
T/N | 0.2162 | likely_benign | 0.2784 | benign | -0.921 | Destabilizing | 0.982 | D | 0.685 | prob.neutral | N | 0.463569668 | None | None | N |
T/P | 0.7454 | likely_pathogenic | 0.8309 | pathogenic | -0.545 | Destabilizing | 0.991 | D | 0.763 | deleterious | N | 0.470727356 | None | None | N |
T/Q | 0.5195 | ambiguous | 0.6266 | pathogenic | -0.967 | Destabilizing | 0.993 | D | 0.771 | deleterious | None | None | None | None | N |
T/R | 0.5631 | ambiguous | 0.68 | pathogenic | -0.609 | Destabilizing | 0.986 | D | 0.769 | deleterious | None | None | None | None | N |
T/S | 0.1319 | likely_benign | 0.1444 | benign | -1.225 | Destabilizing | 0.17 | N | 0.305 | neutral | N | 0.426128788 | None | None | N |
T/V | 0.3446 | ambiguous | 0.4762 | ambiguous | -0.545 | Destabilizing | 0.953 | D | 0.594 | neutral | None | None | None | None | N |
T/W | 0.8676 | likely_pathogenic | 0.9129 | pathogenic | -1.028 | Destabilizing | 0.999 | D | 0.735 | prob.delet. | None | None | None | None | N |
T/Y | 0.6546 | likely_pathogenic | 0.7657 | pathogenic | -0.768 | Destabilizing | 0.998 | D | 0.758 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.