Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18120 | 54583;54584;54585 | chr2:178604731;178604730;178604729 | chr2:179469458;179469457;179469456 |
N2AB | 16479 | 49660;49661;49662 | chr2:178604731;178604730;178604729 | chr2:179469458;179469457;179469456 |
N2A | 15552 | 46879;46880;46881 | chr2:178604731;178604730;178604729 | chr2:179469458;179469457;179469456 |
N2B | 9055 | 27388;27389;27390 | chr2:178604731;178604730;178604729 | chr2:179469458;179469457;179469456 |
Novex-1 | 9180 | 27763;27764;27765 | chr2:178604731;178604730;178604729 | chr2:179469458;179469457;179469456 |
Novex-2 | 9247 | 27964;27965;27966 | chr2:178604731;178604730;178604729 | chr2:179469458;179469457;179469456 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | None | None | 0.005 | N | 0.157 | 0.101 | 0.1749357433 | gnomAD-4.0.0 | 1.37054E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.00476E-07 | 1.16433E-05 | 0 |
T/S | rs770883968 | -0.184 | None | N | 0.101 | 0.104 | 0.136095386433 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.9E-06 | 0 |
T/S | rs770883968 | -0.184 | None | N | 0.101 | 0.104 | 0.136095386433 | gnomAD-4.0.0 | 6.8527E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.00476E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0759 | likely_benign | 0.0762 | benign | -0.501 | Destabilizing | 0.005 | N | 0.157 | neutral | N | 0.455142186 | None | None | I |
T/C | 0.3371 | likely_benign | 0.3063 | benign | -0.181 | Destabilizing | 0.001 | N | 0.197 | neutral | None | None | None | None | I |
T/D | 0.3611 | ambiguous | 0.3396 | benign | -0.137 | Destabilizing | 0.038 | N | 0.277 | neutral | None | None | None | None | I |
T/E | 0.3071 | likely_benign | 0.2986 | benign | -0.2 | Destabilizing | 0.038 | N | 0.298 | neutral | None | None | None | None | I |
T/F | 0.2351 | likely_benign | 0.2302 | benign | -0.826 | Destabilizing | 0.214 | N | 0.348 | neutral | None | None | None | None | I |
T/G | 0.2091 | likely_benign | 0.2043 | benign | -0.677 | Destabilizing | None | N | 0.186 | neutral | None | None | None | None | I |
T/H | 0.2469 | likely_benign | 0.2506 | benign | -0.96 | Destabilizing | 0.676 | D | 0.301 | neutral | None | None | None | None | I |
T/I | 0.1845 | likely_benign | 0.1834 | benign | -0.145 | Destabilizing | None | N | 0.171 | neutral | N | 0.463801742 | None | None | I |
T/K | 0.2213 | likely_benign | 0.236 | benign | -0.577 | Destabilizing | 0.038 | N | 0.298 | neutral | None | None | None | None | I |
T/L | 0.1014 | likely_benign | 0.1025 | benign | -0.145 | Destabilizing | 0.016 | N | 0.261 | neutral | None | None | None | None | I |
T/M | 0.0958 | likely_benign | 0.0918 | benign | 0.146 | Stabilizing | 0.214 | N | 0.324 | neutral | None | None | None | None | I |
T/N | 0.113 | likely_benign | 0.1137 | benign | -0.297 | Destabilizing | 0.029 | N | 0.209 | neutral | N | 0.415701151 | None | None | I |
T/P | 0.43 | ambiguous | 0.43 | ambiguous | -0.234 | Destabilizing | 0.171 | N | 0.397 | neutral | N | 0.461622654 | None | None | I |
T/Q | 0.2219 | likely_benign | 0.2308 | benign | -0.547 | Destabilizing | 0.214 | N | 0.372 | neutral | None | None | None | None | I |
T/R | 0.2004 | likely_benign | 0.2153 | benign | -0.237 | Destabilizing | 0.214 | N | 0.394 | neutral | None | None | None | None | I |
T/S | 0.099 | likely_benign | 0.0947 | benign | -0.499 | Destabilizing | None | N | 0.101 | neutral | N | 0.416698441 | None | None | I |
T/V | 0.1318 | likely_benign | 0.132 | benign | -0.234 | Destabilizing | 0.016 | N | 0.182 | neutral | None | None | None | None | I |
T/W | 0.587 | likely_pathogenic | 0.5618 | ambiguous | -0.807 | Destabilizing | 0.864 | D | 0.335 | neutral | None | None | None | None | I |
T/Y | 0.2367 | likely_benign | 0.2403 | benign | -0.568 | Destabilizing | 0.356 | N | 0.329 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.