Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18123 | 54592;54593;54594 | chr2:178604722;178604721;178604720 | chr2:179469449;179469448;179469447 |
N2AB | 16482 | 49669;49670;49671 | chr2:178604722;178604721;178604720 | chr2:179469449;179469448;179469447 |
N2A | 15555 | 46888;46889;46890 | chr2:178604722;178604721;178604720 | chr2:179469449;179469448;179469447 |
N2B | 9058 | 27397;27398;27399 | chr2:178604722;178604721;178604720 | chr2:179469449;179469448;179469447 |
Novex-1 | 9183 | 27772;27773;27774 | chr2:178604722;178604721;178604720 | chr2:179469449;179469448;179469447 |
Novex-2 | 9250 | 27973;27974;27975 | chr2:178604722;178604721;178604720 | chr2:179469449;179469448;179469447 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/Q | None | None | 0.638 | N | 0.533 | 0.234 | 0.184867976434 | gnomAD-4.0.0 | 1.20033E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.3689 | ambiguous | 0.3798 | ambiguous | -0.172 | Destabilizing | 0.334 | N | 0.499 | neutral | N | 0.457510488 | None | None | N |
E/C | 0.9314 | likely_pathogenic | 0.9415 | pathogenic | -0.421 | Destabilizing | 0.982 | D | 0.651 | neutral | None | None | None | None | N |
E/D | 0.155 | likely_benign | 0.1764 | benign | -0.348 | Destabilizing | 0.001 | N | 0.148 | neutral | N | 0.398542329 | None | None | N |
E/F | 0.9139 | likely_pathogenic | 0.9241 | pathogenic | 0.157 | Stabilizing | 0.982 | D | 0.67 | neutral | None | None | None | None | N |
E/G | 0.2946 | likely_benign | 0.3191 | benign | -0.377 | Destabilizing | 0.334 | N | 0.522 | neutral | N | 0.446834921 | None | None | N |
E/H | 0.7609 | likely_pathogenic | 0.7721 | pathogenic | 0.685 | Stabilizing | 0.947 | D | 0.555 | neutral | None | None | None | None | N |
E/I | 0.7369 | likely_pathogenic | 0.7684 | pathogenic | 0.34 | Stabilizing | 0.826 | D | 0.691 | prob.neutral | None | None | None | None | N |
E/K | 0.4729 | ambiguous | 0.4699 | ambiguous | 0.23 | Stabilizing | 0.334 | N | 0.419 | neutral | N | 0.447256209 | None | None | N |
E/L | 0.707 | likely_pathogenic | 0.7293 | pathogenic | 0.34 | Stabilizing | 0.826 | D | 0.689 | prob.neutral | None | None | None | None | N |
E/M | 0.768 | likely_pathogenic | 0.7911 | pathogenic | 0.059 | Stabilizing | 0.982 | D | 0.641 | neutral | None | None | None | None | N |
E/N | 0.4338 | ambiguous | 0.4951 | ambiguous | -0.262 | Destabilizing | 0.25 | N | 0.491 | neutral | None | None | None | None | N |
E/P | 0.8556 | likely_pathogenic | 0.8943 | pathogenic | 0.189 | Stabilizing | 0.826 | D | 0.645 | neutral | None | None | None | None | N |
E/Q | 0.296 | likely_benign | 0.2908 | benign | -0.18 | Destabilizing | 0.638 | D | 0.533 | neutral | N | 0.449488437 | None | None | N |
E/R | 0.5956 | likely_pathogenic | 0.6067 | pathogenic | 0.631 | Stabilizing | 0.7 | D | 0.573 | neutral | None | None | None | None | N |
E/S | 0.3809 | ambiguous | 0.4355 | ambiguous | -0.415 | Destabilizing | 0.25 | N | 0.409 | neutral | None | None | None | None | N |
E/T | 0.4732 | ambiguous | 0.5174 | ambiguous | -0.231 | Destabilizing | 0.7 | D | 0.588 | neutral | None | None | None | None | N |
E/V | 0.5275 | ambiguous | 0.5422 | ambiguous | 0.189 | Stabilizing | 0.781 | D | 0.66 | neutral | N | 0.472269296 | None | None | N |
E/W | 0.9596 | likely_pathogenic | 0.9612 | pathogenic | 0.319 | Stabilizing | 0.982 | D | 0.657 | neutral | None | None | None | None | N |
E/Y | 0.8318 | likely_pathogenic | 0.8462 | pathogenic | 0.403 | Stabilizing | 0.935 | D | 0.647 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.