Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18128 | 54607;54608;54609 | chr2:178604305;178604304;178604303 | chr2:179469032;179469031;179469030 |
N2AB | 16487 | 49684;49685;49686 | chr2:178604305;178604304;178604303 | chr2:179469032;179469031;179469030 |
N2A | 15560 | 46903;46904;46905 | chr2:178604305;178604304;178604303 | chr2:179469032;179469031;179469030 |
N2B | 9063 | 27412;27413;27414 | chr2:178604305;178604304;178604303 | chr2:179469032;179469031;179469030 |
Novex-1 | 9188 | 27787;27788;27789 | chr2:178604305;178604304;178604303 | chr2:179469032;179469031;179469030 |
Novex-2 | 9255 | 27988;27989;27990 | chr2:178604305;178604304;178604303 | chr2:179469032;179469031;179469030 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/S | rs765843072 | -2.925 | 0.055 | N | 0.723 | 0.37 | 0.722937646298 | gnomAD-2.1.1 | 1.26E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 1.55207E-04 | None | 0 | 0 | 0 |
I/S | rs765843072 | -2.925 | 0.055 | N | 0.723 | 0.37 | 0.722937646298 | gnomAD-4.0.0 | 1.00711E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 2.52202E-04 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.6414 | likely_pathogenic | 0.6892 | pathogenic | -1.653 | Destabilizing | 0.007 | N | 0.617 | neutral | None | None | None | None | N |
I/C | 0.7402 | likely_pathogenic | 0.7512 | pathogenic | -0.752 | Destabilizing | 0.356 | N | 0.774 | deleterious | None | None | None | None | N |
I/D | 0.9833 | likely_pathogenic | 0.9899 | pathogenic | -2.261 | Highly Destabilizing | 0.356 | N | 0.8 | deleterious | None | None | None | None | N |
I/E | 0.9611 | likely_pathogenic | 0.9769 | pathogenic | -1.973 | Destabilizing | 0.136 | N | 0.769 | deleterious | None | None | None | None | N |
I/F | 0.3656 | ambiguous | 0.4055 | ambiguous | -1.051 | Destabilizing | 0.055 | N | 0.646 | neutral | N | 0.487062604 | None | None | N |
I/G | 0.9359 | likely_pathogenic | 0.9569 | pathogenic | -2.177 | Highly Destabilizing | 0.136 | N | 0.759 | deleterious | None | None | None | None | N |
I/H | 0.9358 | likely_pathogenic | 0.9525 | pathogenic | -2.071 | Highly Destabilizing | 0.864 | D | 0.815 | deleterious | None | None | None | None | N |
I/K | 0.9292 | likely_pathogenic | 0.9604 | pathogenic | -1.038 | Destabilizing | 0.136 | N | 0.763 | deleterious | None | None | None | None | N |
I/L | 0.1522 | likely_benign | 0.1978 | benign | -0.097 | Destabilizing | None | N | 0.183 | neutral | N | 0.443690255 | None | None | N |
I/M | 0.2013 | likely_benign | 0.2329 | benign | -0.209 | Destabilizing | 0.002 | N | 0.411 | neutral | N | 0.505477793 | None | None | N |
I/N | 0.842 | likely_pathogenic | 0.8931 | pathogenic | -1.676 | Destabilizing | 0.56 | D | 0.814 | deleterious | N | 0.516868223 | None | None | N |
I/P | 0.9755 | likely_pathogenic | 0.9824 | pathogenic | -0.605 | Destabilizing | 0.356 | N | 0.801 | deleterious | None | None | None | None | N |
I/Q | 0.9186 | likely_pathogenic | 0.9474 | pathogenic | -1.31 | Destabilizing | 0.356 | N | 0.814 | deleterious | None | None | None | None | N |
I/R | 0.9046 | likely_pathogenic | 0.9381 | pathogenic | -1.381 | Destabilizing | 0.356 | N | 0.808 | deleterious | None | None | None | None | N |
I/S | 0.7884 | likely_pathogenic | 0.8356 | pathogenic | -2.15 | Highly Destabilizing | 0.055 | N | 0.723 | prob.delet. | N | 0.505477793 | None | None | N |
I/T | 0.6618 | likely_pathogenic | 0.7063 | pathogenic | -1.703 | Destabilizing | 0.012 | N | 0.639 | neutral | N | 0.49191385 | None | None | N |
I/V | 0.0709 | likely_benign | 0.071 | benign | -0.605 | Destabilizing | None | N | 0.165 | neutral | N | 0.348761296 | None | None | N |
I/W | 0.9653 | likely_pathogenic | 0.9741 | pathogenic | -1.423 | Destabilizing | 0.864 | D | 0.811 | deleterious | None | None | None | None | N |
I/Y | 0.8475 | likely_pathogenic | 0.8923 | pathogenic | -1.081 | Destabilizing | 0.356 | N | 0.786 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.