Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18133 | 54622;54623;54624 | chr2:178604290;178604289;178604288 | chr2:179469017;179469016;179469015 |
N2AB | 16492 | 49699;49700;49701 | chr2:178604290;178604289;178604288 | chr2:179469017;179469016;179469015 |
N2A | 15565 | 46918;46919;46920 | chr2:178604290;178604289;178604288 | chr2:179469017;179469016;179469015 |
N2B | 9068 | 27427;27428;27429 | chr2:178604290;178604289;178604288 | chr2:179469017;179469016;179469015 |
Novex-1 | 9193 | 27802;27803;27804 | chr2:178604290;178604289;178604288 | chr2:179469017;179469016;179469015 |
Novex-2 | 9260 | 28003;28004;28005 | chr2:178604290;178604289;178604288 | chr2:179469017;179469016;179469015 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/L | None | None | 0.669 | N | 0.413 | 0.435 | 0.577797438266 | gnomAD-4.0.0 | 2.08359E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.78673E-05 |
P/S | rs532354607 | None | 0.454 | N | 0.346 | 0.27 | 0.301789629655 | gnomAD-4.0.0 | 2.10634E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.66666E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.1066 | likely_benign | 0.1057 | benign | -1.052 | Destabilizing | 0.454 | N | 0.363 | neutral | N | 0.472067013 | None | None | N |
P/C | 0.6362 | likely_pathogenic | 0.6306 | pathogenic | -0.732 | Destabilizing | 0.998 | D | 0.523 | neutral | None | None | None | None | N |
P/D | 0.7148 | likely_pathogenic | 0.741 | pathogenic | -0.931 | Destabilizing | 0.842 | D | 0.419 | neutral | None | None | None | None | N |
P/E | 0.3919 | ambiguous | 0.3934 | ambiguous | -1.024 | Destabilizing | 0.842 | D | 0.399 | neutral | None | None | None | None | N |
P/F | 0.7693 | likely_pathogenic | 0.7854 | pathogenic | -1.078 | Destabilizing | 0.974 | D | 0.538 | neutral | None | None | None | None | N |
P/G | 0.3903 | ambiguous | 0.4258 | ambiguous | -1.25 | Destabilizing | 0.842 | D | 0.425 | neutral | None | None | None | None | N |
P/H | 0.353 | ambiguous | 0.3494 | ambiguous | -0.73 | Destabilizing | 0.997 | D | 0.467 | neutral | N | 0.486532612 | None | None | N |
P/I | 0.4724 | ambiguous | 0.4858 | ambiguous | -0.655 | Destabilizing | 0.949 | D | 0.564 | neutral | None | None | None | None | N |
P/K | 0.3411 | ambiguous | 0.3474 | ambiguous | -0.893 | Destabilizing | 0.842 | D | 0.401 | neutral | None | None | None | None | N |
P/L | 0.2398 | likely_benign | 0.2301 | benign | -0.655 | Destabilizing | 0.669 | D | 0.413 | neutral | N | 0.486279122 | None | None | N |
P/M | 0.4911 | ambiguous | 0.479 | ambiguous | -0.441 | Destabilizing | 0.991 | D | 0.474 | neutral | None | None | None | None | N |
P/N | 0.4714 | ambiguous | 0.4892 | ambiguous | -0.597 | Destabilizing | 0.842 | D | 0.481 | neutral | None | None | None | None | N |
P/Q | 0.2088 | likely_benign | 0.2077 | benign | -0.893 | Destabilizing | 0.974 | D | 0.453 | neutral | None | None | None | None | N |
P/R | 0.2408 | likely_benign | 0.2366 | benign | -0.241 | Destabilizing | 0.934 | D | 0.493 | neutral | D | 0.527019006 | None | None | N |
P/S | 0.1875 | likely_benign | 0.1936 | benign | -0.994 | Destabilizing | 0.454 | N | 0.346 | neutral | N | 0.494714587 | None | None | N |
P/T | 0.1436 | likely_benign | 0.1354 | benign | -0.992 | Destabilizing | 0.007 | N | 0.131 | neutral | N | 0.492829075 | None | None | N |
P/V | 0.3148 | likely_benign | 0.3194 | benign | -0.752 | Destabilizing | 0.728 | D | 0.356 | neutral | None | None | None | None | N |
P/W | 0.838 | likely_pathogenic | 0.8497 | pathogenic | -1.147 | Destabilizing | 0.998 | D | 0.557 | neutral | None | None | None | None | N |
P/Y | 0.6872 | likely_pathogenic | 0.711 | pathogenic | -0.884 | Destabilizing | 0.991 | D | 0.538 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.