Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18134 | 54625;54626;54627 | chr2:178604287;178604286;178604285 | chr2:179469014;179469013;179469012 |
N2AB | 16493 | 49702;49703;49704 | chr2:178604287;178604286;178604285 | chr2:179469014;179469013;179469012 |
N2A | 15566 | 46921;46922;46923 | chr2:178604287;178604286;178604285 | chr2:179469014;179469013;179469012 |
N2B | 9069 | 27430;27431;27432 | chr2:178604287;178604286;178604285 | chr2:179469014;179469013;179469012 |
Novex-1 | 9194 | 27805;27806;27807 | chr2:178604287;178604286;178604285 | chr2:179469014;179469013;179469012 |
Novex-2 | 9261 | 28006;28007;28008 | chr2:178604287;178604286;178604285 | chr2:179469014;179469013;179469012 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/K | rs1020792831 | None | 0.997 | N | 0.615 | 0.308 | 0.219573609325 | gnomAD-4.0.0 | 2.25945E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 5.77367E-04 | 0 | 0 | 0 |
N/S | rs971483896 | None | 0.978 | N | 0.548 | 0.244 | 0.232513804876 | gnomAD-3.1.2 | 1.32E-05 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 2.94E-05 | 0 | 0 |
N/S | rs971483896 | None | 0.978 | N | 0.548 | 0.244 | 0.232513804876 | gnomAD-4.0.0 | 1.96056E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.51599E-05 | 1.55366E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.1975 | likely_benign | 0.2086 | benign | -0.307 | Destabilizing | 0.967 | D | 0.623 | neutral | None | None | None | None | N |
N/C | 0.3006 | likely_benign | 0.3086 | benign | 0.3 | Stabilizing | 1.0 | D | 0.809 | deleterious | None | None | None | None | N |
N/D | 0.1227 | likely_benign | 0.1461 | benign | 0.109 | Stabilizing | 0.989 | D | 0.585 | neutral | N | 0.460990723 | None | None | N |
N/E | 0.3164 | likely_benign | 0.3891 | ambiguous | 0.095 | Stabilizing | 0.997 | D | 0.615 | neutral | None | None | None | None | N |
N/F | 0.5042 | ambiguous | 0.5136 | ambiguous | -0.518 | Destabilizing | 1.0 | D | 0.758 | deleterious | None | None | None | None | N |
N/G | 0.1498 | likely_benign | 0.16 | benign | -0.516 | Destabilizing | 0.071 | N | 0.311 | neutral | None | None | None | None | N |
N/H | 0.0981 | likely_benign | 0.1026 | benign | -0.481 | Destabilizing | 0.999 | D | 0.615 | neutral | N | 0.476325535 | None | None | N |
N/I | 0.5116 | ambiguous | 0.5309 | ambiguous | 0.164 | Stabilizing | 0.999 | D | 0.764 | deleterious | N | 0.485398116 | None | None | N |
N/K | 0.236 | likely_benign | 0.2878 | benign | 0.01 | Stabilizing | 0.997 | D | 0.615 | neutral | N | 0.471111716 | None | None | N |
N/L | 0.3029 | likely_benign | 0.3099 | benign | 0.164 | Stabilizing | 0.998 | D | 0.745 | deleterious | None | None | None | None | N |
N/M | 0.3975 | ambiguous | 0.4027 | ambiguous | 0.406 | Stabilizing | 1.0 | D | 0.743 | deleterious | None | None | None | None | N |
N/P | 0.8391 | likely_pathogenic | 0.8559 | pathogenic | 0.035 | Stabilizing | 0.999 | D | 0.732 | prob.delet. | None | None | None | None | N |
N/Q | 0.2419 | likely_benign | 0.2771 | benign | -0.414 | Destabilizing | 0.999 | D | 0.62 | neutral | None | None | None | None | N |
N/R | 0.2703 | likely_benign | 0.324 | benign | 0.045 | Stabilizing | 0.999 | D | 0.615 | neutral | None | None | None | None | N |
N/S | 0.0806 | likely_benign | 0.0835 | benign | -0.235 | Destabilizing | 0.978 | D | 0.548 | neutral | N | 0.470418283 | None | None | N |
N/T | 0.172 | likely_benign | 0.1848 | benign | -0.1 | Destabilizing | 0.989 | D | 0.618 | neutral | N | 0.499010394 | None | None | N |
N/V | 0.4068 | ambiguous | 0.4355 | ambiguous | 0.035 | Stabilizing | 0.999 | D | 0.761 | deleterious | None | None | None | None | N |
N/W | 0.716 | likely_pathogenic | 0.7419 | pathogenic | -0.471 | Destabilizing | 1.0 | D | 0.797 | deleterious | None | None | None | None | N |
N/Y | 0.1642 | likely_benign | 0.1672 | benign | -0.224 | Destabilizing | 0.999 | D | 0.726 | prob.delet. | N | 0.437711219 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.