Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18141 | 54646;54647;54648 | chr2:178604266;178604265;178604264 | chr2:179468993;179468992;179468991 |
N2AB | 16500 | 49723;49724;49725 | chr2:178604266;178604265;178604264 | chr2:179468993;179468992;179468991 |
N2A | 15573 | 46942;46943;46944 | chr2:178604266;178604265;178604264 | chr2:179468993;179468992;179468991 |
N2B | 9076 | 27451;27452;27453 | chr2:178604266;178604265;178604264 | chr2:179468993;179468992;179468991 |
Novex-1 | 9201 | 27826;27827;27828 | chr2:178604266;178604265;178604264 | chr2:179468993;179468992;179468991 |
Novex-2 | 9268 | 28027;28028;28029 | chr2:178604266;178604265;178604264 | chr2:179468993;179468992;179468991 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/F | None | None | 0.982 | D | 0.783 | 0.55 | 0.826369311445 | gnomAD-4.0.0 | 1.42257E-06 | None | None | None | None | N | None | 0 | 2.58318E-05 | None | 4.34028E-05 | 0 | None | 0 | 0 | 0 | 0 | 0 |
V/I | rs527461961 | None | 0.046 | N | 0.258 | 0.237 | 0.51028768548 | gnomAD-4.0.0 | 4.979E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 6.4659E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.9148 | likely_pathogenic | 0.877 | pathogenic | -2.75 | Highly Destabilizing | 0.939 | D | 0.612 | neutral | D | 0.536843948 | None | None | N |
V/C | 0.9626 | likely_pathogenic | 0.9525 | pathogenic | -2.204 | Highly Destabilizing | 0.999 | D | 0.783 | deleterious | None | None | None | None | N |
V/D | 0.9992 | likely_pathogenic | 0.9987 | pathogenic | -3.579 | Highly Destabilizing | 0.997 | D | 0.886 | deleterious | D | 0.611606988 | None | None | N |
V/E | 0.9963 | likely_pathogenic | 0.9952 | pathogenic | -3.27 | Highly Destabilizing | 0.998 | D | 0.859 | deleterious | None | None | None | None | N |
V/F | 0.9404 | likely_pathogenic | 0.9161 | pathogenic | -1.497 | Destabilizing | 0.982 | D | 0.783 | deleterious | D | 0.554948203 | None | None | N |
V/G | 0.9506 | likely_pathogenic | 0.9262 | pathogenic | -3.316 | Highly Destabilizing | 0.997 | D | 0.885 | deleterious | D | 0.611606988 | None | None | N |
V/H | 0.999 | likely_pathogenic | 0.9985 | pathogenic | -3.039 | Highly Destabilizing | 0.999 | D | 0.883 | deleterious | None | None | None | None | N |
V/I | 0.1101 | likely_benign | 0.0984 | benign | -1.077 | Destabilizing | 0.046 | N | 0.258 | neutral | N | 0.492717218 | None | None | N |
V/K | 0.9967 | likely_pathogenic | 0.9961 | pathogenic | -2.259 | Highly Destabilizing | 0.993 | D | 0.863 | deleterious | None | None | None | None | N |
V/L | 0.6573 | likely_pathogenic | 0.6456 | pathogenic | -1.077 | Destabilizing | 0.76 | D | 0.503 | neutral | N | 0.497896279 | None | None | N |
V/M | 0.8212 | likely_pathogenic | 0.7887 | pathogenic | -1.427 | Destabilizing | 0.986 | D | 0.679 | prob.neutral | None | None | None | None | N |
V/N | 0.9963 | likely_pathogenic | 0.9946 | pathogenic | -2.93 | Highly Destabilizing | 0.998 | D | 0.907 | deleterious | None | None | None | None | N |
V/P | 0.9978 | likely_pathogenic | 0.997 | pathogenic | -1.622 | Destabilizing | 0.998 | D | 0.879 | deleterious | None | None | None | None | N |
V/Q | 0.9951 | likely_pathogenic | 0.9937 | pathogenic | -2.581 | Highly Destabilizing | 0.998 | D | 0.895 | deleterious | None | None | None | None | N |
V/R | 0.9938 | likely_pathogenic | 0.9922 | pathogenic | -2.256 | Highly Destabilizing | 0.998 | D | 0.911 | deleterious | None | None | None | None | N |
V/S | 0.9855 | likely_pathogenic | 0.9758 | pathogenic | -3.408 | Highly Destabilizing | 0.993 | D | 0.857 | deleterious | None | None | None | None | N |
V/T | 0.9499 | likely_pathogenic | 0.9333 | pathogenic | -2.957 | Highly Destabilizing | 0.953 | D | 0.674 | neutral | None | None | None | None | N |
V/W | 0.9992 | likely_pathogenic | 0.9987 | pathogenic | -2.001 | Highly Destabilizing | 0.999 | D | 0.857 | deleterious | None | None | None | None | N |
V/Y | 0.9948 | likely_pathogenic | 0.992 | pathogenic | -1.823 | Destabilizing | 0.998 | D | 0.794 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.