Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18147 | 54664;54665;54666 | chr2:178604248;178604247;178604246 | chr2:179468975;179468974;179468973 |
N2AB | 16506 | 49741;49742;49743 | chr2:178604248;178604247;178604246 | chr2:179468975;179468974;179468973 |
N2A | 15579 | 46960;46961;46962 | chr2:178604248;178604247;178604246 | chr2:179468975;179468974;179468973 |
N2B | 9082 | 27469;27470;27471 | chr2:178604248;178604247;178604246 | chr2:179468975;179468974;179468973 |
Novex-1 | 9207 | 27844;27845;27846 | chr2:178604248;178604247;178604246 | chr2:179468975;179468974;179468973 |
Novex-2 | 9274 | 28045;28046;28047 | chr2:178604248;178604247;178604246 | chr2:179468975;179468974;179468973 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/N | None | None | 1.0 | N | 0.743 | 0.441 | 0.690350978659 | gnomAD-4.0.0 | 6.99584E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 1.69929E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.9077 | likely_pathogenic | 0.9373 | pathogenic | -0.626 | Destabilizing | 0.998 | D | 0.653 | neutral | None | None | None | None | I |
Y/C | 0.5484 | ambiguous | 0.611 | pathogenic | 0.092 | Stabilizing | 1.0 | D | 0.77 | deleterious | N | 0.50326142 | None | None | I |
Y/D | 0.9021 | likely_pathogenic | 0.9446 | pathogenic | 1.035 | Stabilizing | 1.0 | D | 0.751 | deleterious | N | 0.472606098 | None | None | I |
Y/E | 0.9567 | likely_pathogenic | 0.9746 | pathogenic | 1.015 | Stabilizing | 1.0 | D | 0.721 | prob.delet. | None | None | None | None | I |
Y/F | 0.1138 | likely_benign | 0.1123 | benign | -0.315 | Destabilizing | 0.434 | N | 0.384 | neutral | N | 0.496084732 | None | None | I |
Y/G | 0.9254 | likely_pathogenic | 0.9492 | pathogenic | -0.81 | Destabilizing | 1.0 | D | 0.709 | prob.delet. | None | None | None | None | I |
Y/H | 0.5928 | likely_pathogenic | 0.6664 | pathogenic | 0.24 | Stabilizing | 1.0 | D | 0.655 | neutral | N | 0.51613193 | None | None | I |
Y/I | 0.786 | likely_pathogenic | 0.806 | pathogenic | -0.171 | Destabilizing | 0.999 | D | 0.656 | neutral | None | None | None | None | I |
Y/K | 0.9715 | likely_pathogenic | 0.9817 | pathogenic | 0.273 | Stabilizing | 1.0 | D | 0.721 | prob.delet. | None | None | None | None | I |
Y/L | 0.8068 | likely_pathogenic | 0.849 | pathogenic | -0.171 | Destabilizing | 0.994 | D | 0.619 | neutral | None | None | None | None | I |
Y/M | 0.8299 | likely_pathogenic | 0.869 | pathogenic | -0.025 | Destabilizing | 1.0 | D | 0.684 | prob.neutral | None | None | None | None | I |
Y/N | 0.6623 | likely_pathogenic | 0.766 | pathogenic | 0.108 | Stabilizing | 1.0 | D | 0.743 | deleterious | N | 0.517862726 | None | None | I |
Y/P | 0.9942 | likely_pathogenic | 0.9948 | pathogenic | -0.302 | Destabilizing | 1.0 | D | 0.755 | deleterious | None | None | None | None | I |
Y/Q | 0.925 | likely_pathogenic | 0.953 | pathogenic | 0.145 | Stabilizing | 1.0 | D | 0.702 | prob.neutral | None | None | None | None | I |
Y/R | 0.9412 | likely_pathogenic | 0.9574 | pathogenic | 0.526 | Stabilizing | 1.0 | D | 0.744 | deleterious | None | None | None | None | I |
Y/S | 0.8255 | likely_pathogenic | 0.8889 | pathogenic | -0.367 | Destabilizing | 1.0 | D | 0.713 | prob.delet. | N | 0.513803701 | None | None | I |
Y/T | 0.9227 | likely_pathogenic | 0.9513 | pathogenic | -0.293 | Destabilizing | 1.0 | D | 0.723 | prob.delet. | None | None | None | None | I |
Y/V | 0.7265 | likely_pathogenic | 0.7717 | pathogenic | -0.302 | Destabilizing | 0.997 | D | 0.663 | neutral | None | None | None | None | I |
Y/W | 0.5575 | ambiguous | 0.5464 | ambiguous | -0.435 | Destabilizing | 1.0 | D | 0.651 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.