Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18149 | 54670;54671;54672 | chr2:178604242;178604241;178604240 | chr2:179468969;179468968;179468967 |
N2AB | 16508 | 49747;49748;49749 | chr2:178604242;178604241;178604240 | chr2:179468969;179468968;179468967 |
N2A | 15581 | 46966;46967;46968 | chr2:178604242;178604241;178604240 | chr2:179468969;179468968;179468967 |
N2B | 9084 | 27475;27476;27477 | chr2:178604242;178604241;178604240 | chr2:179468969;179468968;179468967 |
Novex-1 | 9209 | 27850;27851;27852 | chr2:178604242;178604241;178604240 | chr2:179468969;179468968;179468967 |
Novex-2 | 9276 | 28051;28052;28053 | chr2:178604242;178604241;178604240 | chr2:179468969;179468968;179468967 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/N | None | None | 0.055 | N | 0.599 | 0.121 | 0.342400092842 | gnomAD-4.0.0 | 1.65667E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.52073E-05 | 0 |
I/V | None | None | 0.005 | N | 0.267 | 0.056 | 0.349429436713 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 6.07533E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.2146 | likely_benign | 0.1862 | benign | -1.587 | Destabilizing | None | N | 0.317 | neutral | None | None | None | None | I |
I/C | 0.5327 | ambiguous | 0.4635 | ambiguous | -1.028 | Destabilizing | 0.356 | N | 0.565 | neutral | None | None | None | None | I |
I/D | 0.517 | ambiguous | 0.4021 | ambiguous | -0.815 | Destabilizing | 0.072 | N | 0.592 | neutral | None | None | None | None | I |
I/E | 0.3524 | ambiguous | 0.2824 | benign | -0.843 | Destabilizing | 0.072 | N | 0.558 | neutral | None | None | None | None | I |
I/F | 0.1489 | likely_benign | 0.1079 | benign | -1.171 | Destabilizing | 0.295 | N | 0.54 | neutral | N | 0.465759697 | None | None | I |
I/G | 0.5197 | ambiguous | 0.442 | ambiguous | -1.868 | Destabilizing | 0.038 | N | 0.565 | neutral | None | None | None | None | I |
I/H | 0.4147 | ambiguous | 0.3173 | benign | -0.907 | Destabilizing | 0.628 | D | 0.598 | neutral | None | None | None | None | I |
I/K | 0.2804 | likely_benign | 0.2206 | benign | -0.959 | Destabilizing | None | N | 0.463 | neutral | None | None | None | None | I |
I/L | 0.106 | likely_benign | 0.0941 | benign | -0.908 | Destabilizing | 0.005 | N | 0.268 | neutral | N | 0.45983593 | None | None | I |
I/M | 0.1037 | likely_benign | 0.0978 | benign | -0.724 | Destabilizing | 0.295 | N | 0.565 | neutral | N | 0.471093074 | None | None | I |
I/N | 0.2009 | likely_benign | 0.1565 | benign | -0.75 | Destabilizing | 0.055 | N | 0.599 | neutral | N | 0.479595127 | None | None | I |
I/P | 0.4669 | ambiguous | 0.381 | ambiguous | -1.102 | Destabilizing | 0.136 | N | 0.591 | neutral | None | None | None | None | I |
I/Q | 0.2955 | likely_benign | 0.2466 | benign | -0.991 | Destabilizing | 0.214 | N | 0.598 | neutral | None | None | None | None | I |
I/R | 0.2705 | likely_benign | 0.2084 | benign | -0.292 | Destabilizing | 0.038 | N | 0.559 | neutral | None | None | None | None | I |
I/S | 0.2046 | likely_benign | 0.1701 | benign | -1.39 | Destabilizing | 0.012 | N | 0.567 | neutral | N | 0.481461996 | None | None | I |
I/T | 0.1239 | likely_benign | 0.1025 | benign | -1.305 | Destabilizing | None | N | 0.333 | neutral | N | 0.471765077 | None | None | I |
I/V | 0.0653 | likely_benign | 0.0653 | benign | -1.102 | Destabilizing | 0.005 | N | 0.267 | neutral | N | 0.454526111 | None | None | I |
I/W | 0.7217 | likely_pathogenic | 0.6086 | pathogenic | -1.131 | Destabilizing | 0.864 | D | 0.617 | neutral | None | None | None | None | I |
I/Y | 0.3944 | ambiguous | 0.3104 | benign | -0.937 | Destabilizing | 0.356 | N | 0.575 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.