Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18151 | 54676;54677;54678 | chr2:178604236;178604235;178604234 | chr2:179468963;179468962;179468961 |
N2AB | 16510 | 49753;49754;49755 | chr2:178604236;178604235;178604234 | chr2:179468963;179468962;179468961 |
N2A | 15583 | 46972;46973;46974 | chr2:178604236;178604235;178604234 | chr2:179468963;179468962;179468961 |
N2B | 9086 | 27481;27482;27483 | chr2:178604236;178604235;178604234 | chr2:179468963;179468962;179468961 |
Novex-1 | 9211 | 27856;27857;27858 | chr2:178604236;178604235;178604234 | chr2:179468963;179468962;179468961 |
Novex-2 | 9278 | 28057;28058;28059 | chr2:178604236;178604235;178604234 | chr2:179468963;179468962;179468961 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/G | None | None | 0.996 | N | 0.723 | 0.357 | 0.352910780287 | gnomAD-4.0.0 | 6.93126E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.08031E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.2251 | likely_benign | 0.1966 | benign | -0.433 | Destabilizing | 0.998 | D | 0.709 | prob.delet. | N | 0.487883749 | None | None | N |
D/C | 0.7876 | likely_pathogenic | 0.74 | pathogenic | -0.094 | Destabilizing | 1.0 | D | 0.79 | deleterious | None | None | None | None | N |
D/E | 0.149 | likely_benign | 0.133 | benign | -0.536 | Destabilizing | 0.619 | D | 0.293 | neutral | N | 0.401072841 | None | None | N |
D/F | 0.8027 | likely_pathogenic | 0.7485 | pathogenic | -0.325 | Destabilizing | 1.0 | D | 0.808 | deleterious | None | None | None | None | N |
D/G | 0.2552 | likely_benign | 0.2268 | benign | -0.678 | Destabilizing | 0.996 | D | 0.723 | prob.delet. | N | 0.460703134 | None | None | N |
D/H | 0.5047 | ambiguous | 0.4506 | ambiguous | -0.43 | Destabilizing | 1.0 | D | 0.771 | deleterious | N | 0.461463602 | None | None | N |
D/I | 0.6044 | likely_pathogenic | 0.5111 | ambiguous | 0.179 | Stabilizing | 1.0 | D | 0.817 | deleterious | None | None | None | None | N |
D/K | 0.4823 | ambiguous | 0.4287 | ambiguous | -0.054 | Destabilizing | 0.998 | D | 0.734 | prob.delet. | None | None | None | None | N |
D/L | 0.5181 | ambiguous | 0.4587 | ambiguous | 0.179 | Stabilizing | 0.999 | D | 0.805 | deleterious | None | None | None | None | N |
D/M | 0.7397 | likely_pathogenic | 0.6804 | pathogenic | 0.438 | Stabilizing | 1.0 | D | 0.791 | deleterious | None | None | None | None | N |
D/N | 0.1417 | likely_benign | 0.122 | benign | -0.318 | Destabilizing | 0.999 | D | 0.733 | prob.delet. | N | 0.513704913 | None | None | N |
D/P | 0.5706 | likely_pathogenic | 0.5447 | ambiguous | -0.001 | Destabilizing | 1.0 | D | 0.793 | deleterious | None | None | None | None | N |
D/Q | 0.459 | ambiguous | 0.4079 | ambiguous | -0.28 | Destabilizing | 0.998 | D | 0.773 | deleterious | None | None | None | None | N |
D/R | 0.5716 | likely_pathogenic | 0.5228 | ambiguous | 0.102 | Stabilizing | 0.998 | D | 0.781 | deleterious | None | None | None | None | N |
D/S | 0.1644 | likely_benign | 0.145 | benign | -0.472 | Destabilizing | 0.994 | D | 0.711 | prob.delet. | None | None | None | None | N |
D/T | 0.3484 | ambiguous | 0.2854 | benign | -0.287 | Destabilizing | 0.999 | D | 0.783 | deleterious | None | None | None | None | N |
D/V | 0.3732 | ambiguous | 0.3089 | benign | -0.001 | Destabilizing | 0.999 | D | 0.813 | deleterious | N | 0.506989585 | None | None | N |
D/W | 0.9337 | likely_pathogenic | 0.9226 | pathogenic | -0.184 | Destabilizing | 1.0 | D | 0.793 | deleterious | None | None | None | None | N |
D/Y | 0.4504 | ambiguous | 0.404 | ambiguous | -0.098 | Destabilizing | 1.0 | D | 0.807 | deleterious | N | 0.467958062 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.