Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18152 | 54679;54680;54681 | chr2:178604233;178604232;178604231 | chr2:179468960;179468959;179468958 |
N2AB | 16511 | 49756;49757;49758 | chr2:178604233;178604232;178604231 | chr2:179468960;179468959;179468958 |
N2A | 15584 | 46975;46976;46977 | chr2:178604233;178604232;178604231 | chr2:179468960;179468959;179468958 |
N2B | 9087 | 27484;27485;27486 | chr2:178604233;178604232;178604231 | chr2:179468960;179468959;179468958 |
Novex-1 | 9212 | 27859;27860;27861 | chr2:178604233;178604232;178604231 | chr2:179468960;179468959;179468958 |
Novex-2 | 9279 | 28060;28061;28062 | chr2:178604233;178604232;178604231 | chr2:179468960;179468959;179468958 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | None | None | 0.007 | N | 0.231 | 0.03 | 0.0551355673512 | gnomAD-4.0.0 | 6.90601E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.05487E-07 | 0 | 0 |
E/K | None | None | 0.684 | N | 0.437 | 0.222 | 0.218845423259 | gnomAD-4.0.0 | 1.38499E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.07342E-07 | 0 | 1.67949E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1224 | likely_benign | 0.1251 | benign | -0.793 | Destabilizing | 0.028 | N | 0.324 | neutral | N | 0.372078086 | None | None | N |
E/C | 0.7766 | likely_pathogenic | 0.7579 | pathogenic | -0.476 | Destabilizing | 0.996 | D | 0.613 | neutral | None | None | None | None | N |
E/D | 0.1 | likely_benign | 0.084 | benign | -1.048 | Destabilizing | 0.007 | N | 0.231 | neutral | N | 0.459467784 | None | None | N |
E/F | 0.7038 | likely_pathogenic | 0.6331 | pathogenic | -0.334 | Destabilizing | 0.984 | D | 0.593 | neutral | None | None | None | None | N |
E/G | 0.1832 | likely_benign | 0.1656 | benign | -1.117 | Destabilizing | 0.003 | N | 0.434 | neutral | N | 0.422296262 | None | None | N |
E/H | 0.5726 | likely_pathogenic | 0.5261 | ambiguous | -0.496 | Destabilizing | 0.984 | D | 0.529 | neutral | None | None | None | None | N |
E/I | 0.446 | ambiguous | 0.3537 | ambiguous | 0.078 | Stabilizing | 0.953 | D | 0.605 | neutral | None | None | None | None | N |
E/K | 0.4435 | ambiguous | 0.3679 | ambiguous | -0.647 | Destabilizing | 0.684 | D | 0.437 | neutral | N | 0.458947709 | None | None | N |
E/L | 0.6177 | likely_pathogenic | 0.5152 | ambiguous | 0.078 | Stabilizing | 0.742 | D | 0.557 | neutral | None | None | None | None | N |
E/M | 0.6074 | likely_pathogenic | 0.5336 | ambiguous | 0.412 | Stabilizing | 0.996 | D | 0.606 | neutral | None | None | None | None | N |
E/N | 0.3124 | likely_benign | 0.251 | benign | -1.004 | Destabilizing | 0.59 | D | 0.436 | neutral | None | None | None | None | N |
E/P | 0.3104 | likely_benign | 0.3181 | benign | -0.192 | Destabilizing | 0.004 | N | 0.324 | neutral | None | None | None | None | N |
E/Q | 0.2706 | likely_benign | 0.2519 | benign | -0.906 | Destabilizing | 0.815 | D | 0.462 | neutral | N | 0.477533469 | None | None | N |
E/R | 0.6056 | likely_pathogenic | 0.5346 | ambiguous | -0.298 | Destabilizing | 0.953 | D | 0.497 | neutral | None | None | None | None | N |
E/S | 0.1753 | likely_benign | 0.1727 | benign | -1.272 | Destabilizing | 0.373 | N | 0.416 | neutral | None | None | None | None | N |
E/T | 0.2708 | likely_benign | 0.2355 | benign | -1.017 | Destabilizing | 0.742 | D | 0.49 | neutral | None | None | None | None | N |
E/V | 0.2958 | likely_benign | 0.2423 | benign | -0.192 | Destabilizing | 0.684 | D | 0.539 | neutral | N | 0.477013394 | None | None | N |
E/W | 0.905 | likely_pathogenic | 0.8779 | pathogenic | -0.112 | Destabilizing | 0.996 | D | 0.637 | neutral | None | None | None | None | N |
E/Y | 0.5503 | ambiguous | 0.4734 | ambiguous | -0.107 | Destabilizing | 0.984 | D | 0.6 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.