Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18154 | 54685;54686;54687 | chr2:178604227;178604226;178604225 | chr2:179468954;179468953;179468952 |
N2AB | 16513 | 49762;49763;49764 | chr2:178604227;178604226;178604225 | chr2:179468954;179468953;179468952 |
N2A | 15586 | 46981;46982;46983 | chr2:178604227;178604226;178604225 | chr2:179468954;179468953;179468952 |
N2B | 9089 | 27490;27491;27492 | chr2:178604227;178604226;178604225 | chr2:179468954;179468953;179468952 |
Novex-1 | 9214 | 27865;27866;27867 | chr2:178604227;178604226;178604225 | chr2:179468954;179468953;179468952 |
Novex-2 | 9281 | 28066;28067;28068 | chr2:178604227;178604226;178604225 | chr2:179468954;179468953;179468952 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | None | None | None | N | 0.17 | 0.135 | 0.21737058555 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.2831 | likely_benign | 0.2206 | benign | -0.66 | Destabilizing | 0.001 | N | 0.263 | neutral | None | None | None | None | N |
K/C | 0.4948 | ambiguous | 0.4156 | ambiguous | -0.596 | Destabilizing | 0.878 | D | 0.529 | neutral | None | None | None | None | N |
K/D | 0.6531 | likely_pathogenic | 0.5736 | pathogenic | -0.002 | Destabilizing | 0.064 | N | 0.377 | neutral | None | None | None | None | N |
K/E | 0.218 | likely_benign | 0.1734 | benign | 0.118 | Stabilizing | None | N | 0.17 | neutral | N | 0.332264196 | None | None | N |
K/F | 0.5773 | likely_pathogenic | 0.4822 | ambiguous | -0.289 | Destabilizing | 0.538 | D | 0.637 | neutral | None | None | None | None | N |
K/G | 0.4733 | ambiguous | 0.3829 | ambiguous | -1.026 | Destabilizing | 0.121 | N | 0.388 | neutral | None | None | None | None | N |
K/H | 0.2582 | likely_benign | 0.2385 | benign | -1.219 | Destabilizing | 0.703 | D | 0.503 | neutral | None | None | None | None | N |
K/I | 0.1941 | likely_benign | 0.141 | benign | 0.291 | Stabilizing | 0.112 | N | 0.595 | neutral | N | 0.453710539 | None | None | N |
K/L | 0.2341 | likely_benign | 0.1581 | benign | 0.291 | Stabilizing | None | N | 0.361 | neutral | None | None | None | None | N |
K/M | 0.1959 | likely_benign | 0.147 | benign | 0.1 | Stabilizing | 0.538 | D | 0.508 | neutral | None | None | None | None | N |
K/N | 0.427 | ambiguous | 0.3454 | ambiguous | -0.444 | Destabilizing | 0.001 | N | 0.187 | neutral | N | 0.449611441 | None | None | N |
K/P | 0.5705 | likely_pathogenic | 0.4782 | ambiguous | 0.004 | Stabilizing | 0.403 | N | 0.549 | neutral | None | None | None | None | N |
K/Q | 0.1364 | likely_benign | 0.1204 | benign | -0.474 | Destabilizing | 0.201 | N | 0.394 | neutral | N | 0.419461893 | None | None | N |
K/R | 0.0852 | likely_benign | 0.0795 | benign | -0.548 | Destabilizing | 0.094 | N | 0.398 | neutral | N | 0.453017106 | None | None | N |
K/S | 0.3828 | ambiguous | 0.3059 | benign | -1.129 | Destabilizing | 0.029 | N | 0.341 | neutral | None | None | None | None | N |
K/T | 0.1423 | likely_benign | 0.1141 | benign | -0.796 | Destabilizing | None | N | 0.265 | neutral | N | 0.420712686 | None | None | N |
K/V | 0.1913 | likely_benign | 0.1413 | benign | 0.004 | Stabilizing | 0.064 | N | 0.375 | neutral | None | None | None | None | N |
K/W | 0.657 | likely_pathogenic | 0.6132 | pathogenic | -0.151 | Destabilizing | 0.964 | D | 0.54 | neutral | None | None | None | None | N |
K/Y | 0.5121 | ambiguous | 0.4424 | ambiguous | 0.109 | Stabilizing | 0.703 | D | 0.659 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.