Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18156 | 54691;54692;54693 | chr2:178604221;178604220;178604219 | chr2:179468948;179468947;179468946 |
N2AB | 16515 | 49768;49769;49770 | chr2:178604221;178604220;178604219 | chr2:179468948;179468947;179468946 |
N2A | 15588 | 46987;46988;46989 | chr2:178604221;178604220;178604219 | chr2:179468948;179468947;179468946 |
N2B | 9091 | 27496;27497;27498 | chr2:178604221;178604220;178604219 | chr2:179468948;179468947;179468946 |
Novex-1 | 9216 | 27871;27872;27873 | chr2:178604221;178604220;178604219 | chr2:179468948;179468947;179468946 |
Novex-2 | 9283 | 28072;28073;28074 | chr2:178604221;178604220;178604219 | chr2:179468948;179468947;179468946 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/H | None | None | 0.895 | N | 0.566 | 0.292 | 0.289474373501 | gnomAD-4.0.0 | 1.6119E-06 | None | None | None | None | N | None | 0 | 2.32245E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.128 | likely_benign | 0.107 | benign | 0.01 | Stabilizing | 0.376 | N | 0.545 | neutral | N | 0.443055536 | None | None | N |
D/C | 0.6056 | likely_pathogenic | 0.5016 | ambiguous | 0.13 | Stabilizing | 0.992 | D | 0.759 | deleterious | None | None | None | None | N |
D/E | 0.078 | likely_benign | 0.0758 | benign | -0.167 | Destabilizing | 0.002 | N | 0.146 | neutral | N | 0.356724631 | None | None | N |
D/F | 0.6434 | likely_pathogenic | 0.5281 | ambiguous | -0.04 | Destabilizing | 0.972 | D | 0.73 | deleterious | None | None | None | None | N |
D/G | 0.1285 | likely_benign | 0.1053 | benign | -0.146 | Destabilizing | 0.004 | N | 0.421 | neutral | N | 0.460507934 | None | None | N |
D/H | 0.2886 | likely_benign | 0.2218 | benign | 0.269 | Stabilizing | 0.895 | D | 0.566 | neutral | N | 0.504048067 | None | None | N |
D/I | 0.3518 | ambiguous | 0.2632 | benign | 0.354 | Stabilizing | 0.919 | D | 0.734 | deleterious | None | None | None | None | N |
D/K | 0.2062 | likely_benign | 0.1785 | benign | 0.548 | Stabilizing | 0.444 | N | 0.453 | neutral | None | None | None | None | N |
D/L | 0.3396 | likely_benign | 0.2642 | benign | 0.354 | Stabilizing | 0.848 | D | 0.672 | prob.neutral | None | None | None | None | N |
D/M | 0.5082 | ambiguous | 0.433 | ambiguous | 0.325 | Stabilizing | 0.992 | D | 0.721 | deleterious | None | None | None | None | N |
D/N | 0.098 | likely_benign | 0.0804 | benign | 0.323 | Stabilizing | 0.546 | D | 0.594 | neutral | N | 0.447501351 | None | None | N |
D/P | 0.3267 | likely_benign | 0.3056 | benign | 0.261 | Stabilizing | 0.919 | D | 0.603 | neutral | None | None | None | None | N |
D/Q | 0.1899 | likely_benign | 0.1669 | benign | 0.339 | Stabilizing | 0.737 | D | 0.524 | neutral | None | None | None | None | N |
D/R | 0.2804 | likely_benign | 0.2395 | benign | 0.68 | Stabilizing | 0.848 | D | 0.723 | deleterious | None | None | None | None | N |
D/S | 0.1034 | likely_benign | 0.0872 | benign | 0.221 | Stabilizing | 0.444 | N | 0.463 | neutral | None | None | None | None | N |
D/T | 0.1861 | likely_benign | 0.1522 | benign | 0.343 | Stabilizing | 0.615 | D | 0.579 | neutral | None | None | None | None | N |
D/V | 0.2083 | likely_benign | 0.1559 | benign | 0.261 | Stabilizing | 0.808 | D | 0.625 | neutral | N | 0.430531743 | None | None | N |
D/W | 0.8602 | likely_pathogenic | 0.8198 | pathogenic | 0.022 | Stabilizing | 0.992 | D | 0.773 | deleterious | None | None | None | None | N |
D/Y | 0.317 | likely_benign | 0.2413 | benign | 0.194 | Stabilizing | 0.963 | D | 0.73 | deleterious | N | 0.504221425 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.