Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18162 | 54709;54710;54711 | chr2:178604203;178604202;178604201 | chr2:179468930;179468929;179468928 |
N2AB | 16521 | 49786;49787;49788 | chr2:178604203;178604202;178604201 | chr2:179468930;179468929;179468928 |
N2A | 15594 | 47005;47006;47007 | chr2:178604203;178604202;178604201 | chr2:179468930;179468929;179468928 |
N2B | 9097 | 27514;27515;27516 | chr2:178604203;178604202;178604201 | chr2:179468930;179468929;179468928 |
Novex-1 | 9222 | 27889;27890;27891 | chr2:178604203;178604202;178604201 | chr2:179468930;179468929;179468928 |
Novex-2 | 9289 | 28090;28091;28092 | chr2:178604203;178604202;178604201 | chr2:179468930;179468929;179468928 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/V | None | None | 1.0 | N | 0.709 | 0.531 | 0.641425284928 | gnomAD-4.0.0 | 1.59632E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43843E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.7479 | likely_pathogenic | 0.6358 | pathogenic | -0.113 | Destabilizing | 1.0 | D | 0.663 | prob.neutral | N | 0.515705069 | None | None | N |
D/C | 0.9584 | likely_pathogenic | 0.9177 | pathogenic | -0.063 | Destabilizing | 1.0 | D | 0.738 | deleterious | None | None | None | None | N |
D/E | 0.6673 | likely_pathogenic | 0.5776 | pathogenic | -0.274 | Destabilizing | 0.999 | D | 0.496 | neutral | N | 0.495041795 | None | None | N |
D/F | 0.9301 | likely_pathogenic | 0.8511 | pathogenic | -0.143 | Destabilizing | 1.0 | D | 0.738 | deleterious | None | None | None | None | N |
D/G | 0.7771 | likely_pathogenic | 0.6768 | pathogenic | -0.277 | Destabilizing | 1.0 | D | 0.732 | deleterious | N | 0.47155246 | None | None | N |
D/H | 0.8096 | likely_pathogenic | 0.6527 | pathogenic | 0.196 | Stabilizing | 1.0 | D | 0.777 | deleterious | N | 0.505181431 | None | None | N |
D/I | 0.9156 | likely_pathogenic | 0.8423 | pathogenic | 0.259 | Stabilizing | 1.0 | D | 0.734 | deleterious | None | None | None | None | N |
D/K | 0.9397 | likely_pathogenic | 0.9094 | pathogenic | 0.297 | Stabilizing | 1.0 | D | 0.723 | deleterious | None | None | None | None | N |
D/L | 0.8707 | likely_pathogenic | 0.7717 | pathogenic | 0.259 | Stabilizing | 1.0 | D | 0.729 | deleterious | None | None | None | None | N |
D/M | 0.9596 | likely_pathogenic | 0.9228 | pathogenic | 0.19 | Stabilizing | 1.0 | D | 0.693 | prob.delet. | None | None | None | None | N |
D/N | 0.2871 | likely_benign | 0.2508 | benign | 0.093 | Stabilizing | 1.0 | D | 0.676 | prob.neutral | N | 0.489193258 | None | None | N |
D/P | 0.9013 | likely_pathogenic | 0.8787 | pathogenic | 0.156 | Stabilizing | 1.0 | D | 0.721 | deleterious | None | None | None | None | N |
D/Q | 0.9169 | likely_pathogenic | 0.8687 | pathogenic | 0.105 | Stabilizing | 1.0 | D | 0.75 | deleterious | None | None | None | None | N |
D/R | 0.9551 | likely_pathogenic | 0.9295 | pathogenic | 0.516 | Stabilizing | 1.0 | D | 0.722 | deleterious | None | None | None | None | N |
D/S | 0.5576 | ambiguous | 0.4529 | ambiguous | -0.026 | Destabilizing | 1.0 | D | 0.723 | deleterious | None | None | None | None | N |
D/T | 0.8297 | likely_pathogenic | 0.7499 | pathogenic | 0.096 | Stabilizing | 1.0 | D | 0.723 | deleterious | None | None | None | None | N |
D/V | 0.8117 | likely_pathogenic | 0.6995 | pathogenic | 0.156 | Stabilizing | 1.0 | D | 0.709 | prob.delet. | N | 0.478678803 | None | None | N |
D/W | 0.9849 | likely_pathogenic | 0.9707 | pathogenic | -0.072 | Destabilizing | 1.0 | D | 0.687 | prob.delet. | None | None | None | None | N |
D/Y | 0.5992 | likely_pathogenic | 0.4235 | ambiguous | 0.078 | Stabilizing | 1.0 | D | 0.735 | deleterious | N | 0.506797584 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.