Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC1816654721;54722;54723 chr2:178604191;178604190;178604189chr2:179468918;179468917;179468916
N2AB1652549798;49799;49800 chr2:178604191;178604190;178604189chr2:179468918;179468917;179468916
N2A1559847017;47018;47019 chr2:178604191;178604190;178604189chr2:179468918;179468917;179468916
N2B910127526;27527;27528 chr2:178604191;178604190;178604189chr2:179468918;179468917;179468916
Novex-1922627901;27902;27903 chr2:178604191;178604190;178604189chr2:179468918;179468917;179468916
Novex-2929328102;28103;28104 chr2:178604191;178604190;178604189chr2:179468918;179468917;179468916
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: L
  • RefSeq wild type transcript codon: CTT
  • RefSeq wild type template codon: GAA
  • Domain: Fn3-20
  • Domain position: 1
  • Structural Position: 1
  • Q(SASA): 0.5196
  • Predicted PPI site: I

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
L/F rs878953621 None 0.623 N 0.51 0.167 0.402043589563 gnomAD-4.0.0 6.84993E-07 None None None None I None 2.99563E-05 0 None 0 0 None 0 0 0 0 0

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
L/A 0.2486 likely_benign 0.2503 benign -0.61 Destabilizing 0.134 N 0.49 neutral None None None None I
L/C 0.5281 ambiguous 0.5411 ambiguous -0.59 Destabilizing 0.892 D 0.566 neutral None None None None I
L/D 0.7463 likely_pathogenic 0.7544 pathogenic -0.021 Destabilizing 0.519 D 0.833 deleterious None None None None I
L/E 0.4078 ambiguous 0.4182 ambiguous -0.123 Destabilizing 0.519 D 0.797 deleterious None None None None I
L/F 0.2735 likely_benign 0.2688 benign -0.708 Destabilizing 0.623 D 0.51 neutral N 0.513320911 None None I
L/G 0.5587 ambiguous 0.5647 pathogenic -0.758 Destabilizing 0.519 D 0.685 prob.delet. None None None None I
L/H 0.3211 likely_benign 0.3244 benign -0.078 Destabilizing 0.95 D 0.815 deleterious N 0.463287254 None None I
L/I 0.13 likely_benign 0.1253 benign -0.35 Destabilizing 0.104 N 0.507 neutral N 0.46279609 None None I
L/K 0.2332 likely_benign 0.2593 benign -0.177 Destabilizing 0.519 D 0.623 neutral None None None None I
L/M 0.154 likely_benign 0.162 benign -0.302 Destabilizing 0.687 D 0.52 neutral None None None None I
L/N 0.427 ambiguous 0.4496 ambiguous 0.027 Stabilizing 0.519 D 0.835 deleterious None None None None I
L/P 0.1246 likely_benign 0.1288 benign -0.404 Destabilizing 0.002 N 0.414 neutral N 0.372675518 None None I
L/Q 0.1717 likely_benign 0.1728 benign -0.232 Destabilizing 0.687 D 0.845 deleterious None None None None I
L/R 0.2161 likely_benign 0.2119 benign 0.364 Stabilizing 0.449 N 0.836 deleterious N 0.46027586 None None I
L/S 0.3643 ambiguous 0.3624 ambiguous -0.457 Destabilizing 0.134 N 0.529 neutral None None None None I
L/T 0.2504 likely_benign 0.2258 benign -0.451 Destabilizing 0.002 N 0.322 neutral None None None None I
L/V 0.1204 likely_benign 0.1206 benign -0.404 Destabilizing 0.104 N 0.457 neutral N 0.421581399 None None I
L/W 0.4817 ambiguous 0.4468 ambiguous -0.693 Destabilizing 0.962 D 0.829 deleterious None None None None I
L/Y 0.4284 ambiguous 0.4349 ambiguous -0.42 Destabilizing 0.687 D 0.518 neutral None None None None I

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.