Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18166 | 54721;54722;54723 | chr2:178604191;178604190;178604189 | chr2:179468918;179468917;179468916 |
N2AB | 16525 | 49798;49799;49800 | chr2:178604191;178604190;178604189 | chr2:179468918;179468917;179468916 |
N2A | 15598 | 47017;47018;47019 | chr2:178604191;178604190;178604189 | chr2:179468918;179468917;179468916 |
N2B | 9101 | 27526;27527;27528 | chr2:178604191;178604190;178604189 | chr2:179468918;179468917;179468916 |
Novex-1 | 9226 | 27901;27902;27903 | chr2:178604191;178604190;178604189 | chr2:179468918;179468917;179468916 |
Novex-2 | 9293 | 28102;28103;28104 | chr2:178604191;178604190;178604189 | chr2:179468918;179468917;179468916 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/F | rs878953621 | None | 0.623 | N | 0.51 | 0.167 | 0.402043589563 | gnomAD-4.0.0 | 6.84993E-07 | None | None | None | None | I | None | 2.99563E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.2486 | likely_benign | 0.2503 | benign | -0.61 | Destabilizing | 0.134 | N | 0.49 | neutral | None | None | None | None | I |
L/C | 0.5281 | ambiguous | 0.5411 | ambiguous | -0.59 | Destabilizing | 0.892 | D | 0.566 | neutral | None | None | None | None | I |
L/D | 0.7463 | likely_pathogenic | 0.7544 | pathogenic | -0.021 | Destabilizing | 0.519 | D | 0.833 | deleterious | None | None | None | None | I |
L/E | 0.4078 | ambiguous | 0.4182 | ambiguous | -0.123 | Destabilizing | 0.519 | D | 0.797 | deleterious | None | None | None | None | I |
L/F | 0.2735 | likely_benign | 0.2688 | benign | -0.708 | Destabilizing | 0.623 | D | 0.51 | neutral | N | 0.513320911 | None | None | I |
L/G | 0.5587 | ambiguous | 0.5647 | pathogenic | -0.758 | Destabilizing | 0.519 | D | 0.685 | prob.delet. | None | None | None | None | I |
L/H | 0.3211 | likely_benign | 0.3244 | benign | -0.078 | Destabilizing | 0.95 | D | 0.815 | deleterious | N | 0.463287254 | None | None | I |
L/I | 0.13 | likely_benign | 0.1253 | benign | -0.35 | Destabilizing | 0.104 | N | 0.507 | neutral | N | 0.46279609 | None | None | I |
L/K | 0.2332 | likely_benign | 0.2593 | benign | -0.177 | Destabilizing | 0.519 | D | 0.623 | neutral | None | None | None | None | I |
L/M | 0.154 | likely_benign | 0.162 | benign | -0.302 | Destabilizing | 0.687 | D | 0.52 | neutral | None | None | None | None | I |
L/N | 0.427 | ambiguous | 0.4496 | ambiguous | 0.027 | Stabilizing | 0.519 | D | 0.835 | deleterious | None | None | None | None | I |
L/P | 0.1246 | likely_benign | 0.1288 | benign | -0.404 | Destabilizing | 0.002 | N | 0.414 | neutral | N | 0.372675518 | None | None | I |
L/Q | 0.1717 | likely_benign | 0.1728 | benign | -0.232 | Destabilizing | 0.687 | D | 0.845 | deleterious | None | None | None | None | I |
L/R | 0.2161 | likely_benign | 0.2119 | benign | 0.364 | Stabilizing | 0.449 | N | 0.836 | deleterious | N | 0.46027586 | None | None | I |
L/S | 0.3643 | ambiguous | 0.3624 | ambiguous | -0.457 | Destabilizing | 0.134 | N | 0.529 | neutral | None | None | None | None | I |
L/T | 0.2504 | likely_benign | 0.2258 | benign | -0.451 | Destabilizing | 0.002 | N | 0.322 | neutral | None | None | None | None | I |
L/V | 0.1204 | likely_benign | 0.1206 | benign | -0.404 | Destabilizing | 0.104 | N | 0.457 | neutral | N | 0.421581399 | None | None | I |
L/W | 0.4817 | ambiguous | 0.4468 | ambiguous | -0.693 | Destabilizing | 0.962 | D | 0.829 | deleterious | None | None | None | None | I |
L/Y | 0.4284 | ambiguous | 0.4349 | ambiguous | -0.42 | Destabilizing | 0.687 | D | 0.518 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.