Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18169 | 54730;54731;54732 | chr2:178604182;178604181;178604180 | chr2:179468909;179468908;179468907 |
N2AB | 16528 | 49807;49808;49809 | chr2:178604182;178604181;178604180 | chr2:179468909;179468908;179468907 |
N2A | 15601 | 47026;47027;47028 | chr2:178604182;178604181;178604180 | chr2:179468909;179468908;179468907 |
N2B | 9104 | 27535;27536;27537 | chr2:178604182;178604181;178604180 | chr2:179468909;179468908;179468907 |
Novex-1 | 9229 | 27910;27911;27912 | chr2:178604182;178604181;178604180 | chr2:179468909;179468908;179468907 |
Novex-2 | 9296 | 28111;28112;28113 | chr2:178604182;178604181;178604180 | chr2:179468909;179468908;179468907 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/H | rs2054202479 | None | 1.0 | N | 0.899 | 0.446 | 0.648488047482 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | I | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
P/H | rs2054202479 | None | 1.0 | N | 0.899 | 0.446 | 0.648488047482 | gnomAD-4.0.0 | 6.58094E-06 | None | None | None | None | I | None | 2.41499E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
P/L | None | None | 0.987 | N | 0.882 | 0.446 | 0.776041197187 | gnomAD-4.0.0 | 2.05477E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.80026E-06 | 0 | 1.65898E-05 |
P/R | None | None | 0.997 | N | 0.891 | 0.45 | 0.600640161457 | gnomAD-4.0.0 | 6.84925E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 1.87498E-05 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.0951 | likely_benign | 0.086 | benign | -1.567 | Destabilizing | 0.117 | N | 0.53 | neutral | N | 0.494945794 | None | None | I |
P/C | 0.58 | likely_pathogenic | 0.5995 | pathogenic | -1.065 | Destabilizing | 0.999 | D | 0.913 | deleterious | None | None | None | None | I |
P/D | 0.8316 | likely_pathogenic | 0.8115 | pathogenic | -1.698 | Destabilizing | 0.998 | D | 0.877 | deleterious | None | None | None | None | I |
P/E | 0.4733 | ambiguous | 0.4682 | ambiguous | -1.723 | Destabilizing | 0.995 | D | 0.871 | deleterious | None | None | None | None | I |
P/F | 0.6697 | likely_pathogenic | 0.6328 | pathogenic | -1.318 | Destabilizing | 0.999 | D | 0.913 | deleterious | None | None | None | None | I |
P/G | 0.5143 | ambiguous | 0.5079 | ambiguous | -1.853 | Destabilizing | 0.966 | D | 0.853 | deleterious | None | None | None | None | I |
P/H | 0.4044 | ambiguous | 0.3842 | ambiguous | -1.392 | Destabilizing | 1.0 | D | 0.899 | deleterious | N | 0.505138667 | None | None | I |
P/I | 0.4388 | ambiguous | 0.4076 | ambiguous | -0.882 | Destabilizing | 0.995 | D | 0.895 | deleterious | None | None | None | None | I |
P/K | 0.4233 | ambiguous | 0.4419 | ambiguous | -1.27 | Destabilizing | 0.995 | D | 0.877 | deleterious | None | None | None | None | I |
P/L | 0.2868 | likely_benign | 0.2557 | benign | -0.882 | Destabilizing | 0.987 | D | 0.882 | deleterious | N | 0.520026918 | None | None | I |
P/M | 0.4509 | ambiguous | 0.4443 | ambiguous | -0.668 | Destabilizing | 1.0 | D | 0.9 | deleterious | None | None | None | None | I |
P/N | 0.6604 | likely_pathogenic | 0.6339 | pathogenic | -1.044 | Destabilizing | 0.998 | D | 0.882 | deleterious | None | None | None | None | I |
P/Q | 0.2599 | likely_benign | 0.248 | benign | -1.29 | Destabilizing | 0.998 | D | 0.875 | deleterious | None | None | None | None | I |
P/R | 0.2907 | likely_benign | 0.2864 | benign | -0.696 | Destabilizing | 0.997 | D | 0.891 | deleterious | N | 0.48929891 | None | None | I |
P/S | 0.2261 | likely_benign | 0.2176 | benign | -1.499 | Destabilizing | 0.987 | D | 0.848 | deleterious | N | 0.470434186 | None | None | I |
P/T | 0.2617 | likely_benign | 0.237 | benign | -1.428 | Destabilizing | 0.993 | D | 0.862 | deleterious | N | 0.501415684 | None | None | I |
P/V | 0.3053 | likely_benign | 0.294 | benign | -1.077 | Destabilizing | 0.99 | D | 0.868 | deleterious | None | None | None | None | I |
P/W | 0.875 | likely_pathogenic | 0.8646 | pathogenic | -1.47 | Destabilizing | 1.0 | D | 0.873 | deleterious | None | None | None | None | I |
P/Y | 0.6866 | likely_pathogenic | 0.6658 | pathogenic | -1.203 | Destabilizing | 1.0 | D | 0.915 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.