Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18174 | 54745;54746;54747 | chr2:178604167;178604166;178604165 | chr2:179468894;179468893;179468892 |
N2AB | 16533 | 49822;49823;49824 | chr2:178604167;178604166;178604165 | chr2:179468894;179468893;179468892 |
N2A | 15606 | 47041;47042;47043 | chr2:178604167;178604166;178604165 | chr2:179468894;179468893;179468892 |
N2B | 9109 | 27550;27551;27552 | chr2:178604167;178604166;178604165 | chr2:179468894;179468893;179468892 |
Novex-1 | 9234 | 27925;27926;27927 | chr2:178604167;178604166;178604165 | chr2:179468894;179468893;179468892 |
Novex-2 | 9301 | 28126;28127;28128 | chr2:178604167;178604166;178604165 | chr2:179468894;179468893;179468892 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | None | None | 0.055 | N | 0.467 | 0.077 | 0.154104182512 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 1.94401E-04 | None | 0 | 0 | 0 | 0 | 0 |
K/N | None | None | 0.055 | N | 0.467 | 0.077 | 0.154104182512 | gnomAD-4.0.0 | 1.24062E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.23654E-05 | None | 0 | 0 | 8.48228E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.2233 | likely_benign | 0.1639 | benign | -0.202 | Destabilizing | None | N | 0.264 | neutral | None | None | None | None | N |
K/C | 0.5193 | ambiguous | 0.4864 | ambiguous | -0.301 | Destabilizing | 0.676 | D | 0.503 | neutral | None | None | None | None | N |
K/D | 0.5411 | ambiguous | 0.4304 | ambiguous | 0.254 | Stabilizing | 0.072 | N | 0.561 | neutral | None | None | None | None | N |
K/E | 0.126 | likely_benign | 0.0991 | benign | 0.323 | Stabilizing | 0.012 | N | 0.481 | neutral | N | 0.452219311 | None | None | N |
K/F | 0.6465 | likely_pathogenic | 0.5605 | ambiguous | -0.033 | Destabilizing | 0.214 | N | 0.517 | neutral | None | None | None | None | N |
K/G | 0.4459 | ambiguous | 0.3302 | benign | -0.509 | Destabilizing | 0.031 | N | 0.467 | neutral | None | None | None | None | N |
K/H | 0.2535 | likely_benign | 0.2121 | benign | -0.796 | Destabilizing | 0.214 | N | 0.541 | neutral | None | None | None | None | N |
K/I | 0.211 | likely_benign | 0.1837 | benign | 0.56 | Stabilizing | 0.01 | N | 0.547 | neutral | N | 0.491239059 | None | None | N |
K/L | 0.2773 | likely_benign | 0.2149 | benign | 0.56 | Stabilizing | 0.016 | N | 0.462 | neutral | None | None | None | None | N |
K/M | 0.1864 | likely_benign | 0.1554 | benign | 0.291 | Stabilizing | 0.214 | N | 0.542 | neutral | None | None | None | None | N |
K/N | 0.3818 | ambiguous | 0.3014 | benign | 0.006 | Stabilizing | 0.055 | N | 0.467 | neutral | N | 0.514595922 | None | None | N |
K/P | 0.9265 | likely_pathogenic | 0.8664 | pathogenic | 0.337 | Stabilizing | 0.136 | N | 0.58 | neutral | None | None | None | None | N |
K/Q | 0.1038 | likely_benign | 0.0896 | benign | -0.087 | Destabilizing | None | N | 0.289 | neutral | N | 0.470380998 | None | None | N |
K/R | 0.0745 | likely_benign | 0.0719 | benign | -0.307 | Destabilizing | None | N | 0.287 | neutral | N | 0.446234701 | None | None | N |
K/S | 0.3194 | likely_benign | 0.2333 | benign | -0.6 | Destabilizing | 0.003 | N | 0.212 | neutral | None | None | None | None | N |
K/T | 0.1085 | likely_benign | 0.088 | benign | -0.343 | Destabilizing | None | N | 0.286 | neutral | N | 0.416546513 | None | None | N |
K/V | 0.1524 | likely_benign | 0.1325 | benign | 0.337 | Stabilizing | None | N | 0.343 | neutral | None | None | None | None | N |
K/W | 0.7357 | likely_pathogenic | 0.6377 | pathogenic | 0.042 | Stabilizing | 0.864 | D | 0.534 | neutral | None | None | None | None | N |
K/Y | 0.5869 | likely_pathogenic | 0.4966 | ambiguous | 0.342 | Stabilizing | 0.356 | N | 0.536 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.