Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18180 | 54763;54764;54765 | chr2:178604149;178604148;178604147 | chr2:179468876;179468875;179468874 |
N2AB | 16539 | 49840;49841;49842 | chr2:178604149;178604148;178604147 | chr2:179468876;179468875;179468874 |
N2A | 15612 | 47059;47060;47061 | chr2:178604149;178604148;178604147 | chr2:179468876;179468875;179468874 |
N2B | 9115 | 27568;27569;27570 | chr2:178604149;178604148;178604147 | chr2:179468876;179468875;179468874 |
Novex-1 | 9240 | 27943;27944;27945 | chr2:178604149;178604148;178604147 | chr2:179468876;179468875;179468874 |
Novex-2 | 9307 | 28144;28145;28146 | chr2:178604149;178604148;178604147 | chr2:179468876;179468875;179468874 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | None | None | 0.625 | N | 0.401 | 0.128 | 0.240491677333 | gnomAD-4.0.0 | 1.59444E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86421E-06 | 0 | 0 |
K/R | rs1283224972 | 0.139 | 0.005 | N | 0.073 | 0.077 | 0.241664281697 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 1.66113E-04 |
K/R | rs1283224972 | 0.139 | 0.005 | N | 0.073 | 0.077 | 0.241664281697 | gnomAD-4.0.0 | 3.18897E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 6.06024E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.4104 | ambiguous | 0.2857 | benign | -0.162 | Destabilizing | 0.688 | D | 0.401 | neutral | None | None | None | None | N |
K/C | 0.7966 | likely_pathogenic | 0.6615 | pathogenic | -0.2 | Destabilizing | 0.998 | D | 0.477 | neutral | None | None | None | None | N |
K/D | 0.8378 | likely_pathogenic | 0.7543 | pathogenic | -0.034 | Destabilizing | 0.728 | D | 0.406 | neutral | None | None | None | None | N |
K/E | 0.4224 | ambiguous | 0.2953 | benign | -0.047 | Destabilizing | 0.625 | D | 0.401 | neutral | N | 0.474514594 | None | None | N |
K/F | 0.9386 | likely_pathogenic | 0.8657 | pathogenic | -0.564 | Destabilizing | 0.974 | D | 0.465 | neutral | None | None | None | None | N |
K/G | 0.5035 | ambiguous | 0.3561 | ambiguous | -0.343 | Destabilizing | 0.842 | D | 0.429 | neutral | None | None | None | None | N |
K/H | 0.5614 | ambiguous | 0.386 | ambiguous | -0.827 | Destabilizing | 0.037 | N | 0.248 | neutral | None | None | None | None | N |
K/I | 0.7251 | likely_pathogenic | 0.6039 | pathogenic | 0.229 | Stabilizing | 0.966 | D | 0.481 | neutral | N | 0.476079272 | None | None | N |
K/L | 0.6725 | likely_pathogenic | 0.5384 | ambiguous | 0.229 | Stabilizing | 0.842 | D | 0.449 | neutral | None | None | None | None | N |
K/M | 0.5468 | ambiguous | 0.4143 | ambiguous | 0.367 | Stabilizing | 0.998 | D | 0.396 | neutral | None | None | None | None | N |
K/N | 0.7437 | likely_pathogenic | 0.6217 | pathogenic | 0.243 | Stabilizing | 0.051 | N | 0.143 | neutral | N | 0.497623527 | None | None | N |
K/P | 0.6875 | likely_pathogenic | 0.5929 | pathogenic | 0.126 | Stabilizing | 0.991 | D | 0.429 | neutral | None | None | None | None | N |
K/Q | 0.2578 | likely_benign | 0.1716 | benign | -0.066 | Destabilizing | 0.801 | D | 0.423 | neutral | N | 0.504512214 | None | None | N |
K/R | 0.0764 | likely_benign | 0.0649 | benign | 0.025 | Stabilizing | 0.005 | N | 0.073 | neutral | N | 0.434748271 | None | None | N |
K/S | 0.589 | likely_pathogenic | 0.4325 | ambiguous | -0.292 | Destabilizing | 0.842 | D | 0.348 | neutral | None | None | None | None | N |
K/T | 0.4192 | ambiguous | 0.3049 | benign | -0.164 | Destabilizing | 0.801 | D | 0.398 | neutral | N | 0.501778553 | None | None | N |
K/V | 0.6074 | likely_pathogenic | 0.4869 | ambiguous | 0.126 | Stabilizing | 0.974 | D | 0.423 | neutral | None | None | None | None | N |
K/W | 0.9108 | likely_pathogenic | 0.813 | pathogenic | -0.515 | Destabilizing | 0.998 | D | 0.595 | neutral | None | None | None | None | N |
K/Y | 0.8694 | likely_pathogenic | 0.7568 | pathogenic | -0.128 | Destabilizing | 0.949 | D | 0.448 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.