Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18188 | 54787;54788;54789 | chr2:178604125;178604124;178604123 | chr2:179468852;179468851;179468850 |
N2AB | 16547 | 49864;49865;49866 | chr2:178604125;178604124;178604123 | chr2:179468852;179468851;179468850 |
N2A | 15620 | 47083;47084;47085 | chr2:178604125;178604124;178604123 | chr2:179468852;179468851;179468850 |
N2B | 9123 | 27592;27593;27594 | chr2:178604125;178604124;178604123 | chr2:179468852;179468851;179468850 |
Novex-1 | 9248 | 27967;27968;27969 | chr2:178604125;178604124;178604123 | chr2:179468852;179468851;179468850 |
Novex-2 | 9315 | 28168;28169;28170 | chr2:178604125;178604124;178604123 | chr2:179468852;179468851;179468850 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | None | None | 0.966 | N | 0.586 | 0.276 | 0.453401982733 | gnomAD-4.0.0 | 1.59411E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 1.88352E-05 | 0 | 0 | 0 | 0 |
T/N | None | None | 0.801 | N | 0.419 | 0.172 | 0.346085882481 | gnomAD-4.0.0 | 1.59411E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86395E-06 | 0 | 0 |
T/S | None | None | 0.625 | N | 0.443 | 0.104 | 0.203808441222 | gnomAD-4.0.0 | 1.59411E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86395E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0871 | likely_benign | 0.0785 | benign | -0.99 | Destabilizing | 0.625 | D | 0.403 | neutral | N | 0.419338889 | None | None | N |
T/C | 0.4279 | ambiguous | 0.4123 | ambiguous | -0.684 | Destabilizing | 0.998 | D | 0.528 | neutral | None | None | None | None | N |
T/D | 0.2219 | likely_benign | 0.1922 | benign | -0.255 | Destabilizing | 0.525 | D | 0.426 | neutral | None | None | None | None | N |
T/E | 0.155 | likely_benign | 0.1274 | benign | -0.204 | Destabilizing | 0.002 | N | 0.247 | neutral | None | None | None | None | N |
T/F | 0.2491 | likely_benign | 0.1838 | benign | -0.97 | Destabilizing | 0.991 | D | 0.581 | neutral | None | None | None | None | N |
T/G | 0.1973 | likely_benign | 0.196 | benign | -1.296 | Destabilizing | 0.842 | D | 0.496 | neutral | None | None | None | None | N |
T/H | 0.258 | likely_benign | 0.1972 | benign | -1.531 | Destabilizing | 0.974 | D | 0.568 | neutral | None | None | None | None | N |
T/I | 0.1542 | likely_benign | 0.1261 | benign | -0.248 | Destabilizing | 0.966 | D | 0.586 | neutral | N | 0.469420992 | None | None | N |
T/K | 0.1851 | likely_benign | 0.1479 | benign | -0.734 | Destabilizing | 0.525 | D | 0.451 | neutral | None | None | None | None | N |
T/L | 0.084 | likely_benign | 0.0718 | benign | -0.248 | Destabilizing | 0.842 | D | 0.456 | neutral | None | None | None | None | N |
T/M | 0.096 | likely_benign | 0.0788 | benign | -0.073 | Destabilizing | 0.991 | D | 0.547 | neutral | None | None | None | None | N |
T/N | 0.0908 | likely_benign | 0.0761 | benign | -0.832 | Destabilizing | 0.801 | D | 0.419 | neutral | N | 0.450603158 | None | None | N |
T/P | 0.1103 | likely_benign | 0.1147 | benign | -0.462 | Destabilizing | 0.891 | D | 0.557 | neutral | N | 0.489796264 | None | None | N |
T/Q | 0.1573 | likely_benign | 0.1276 | benign | -0.878 | Destabilizing | 0.08 | N | 0.212 | neutral | None | None | None | None | N |
T/R | 0.2252 | likely_benign | 0.1682 | benign | -0.626 | Destabilizing | 0.842 | D | 0.487 | neutral | None | None | None | None | N |
T/S | 0.0951 | likely_benign | 0.0881 | benign | -1.152 | Destabilizing | 0.625 | D | 0.443 | neutral | N | 0.432900045 | None | None | N |
T/V | 0.1203 | likely_benign | 0.1051 | benign | -0.462 | Destabilizing | 0.915 | D | 0.436 | neutral | None | None | None | None | N |
T/W | 0.6124 | likely_pathogenic | 0.5436 | ambiguous | -0.912 | Destabilizing | 0.998 | D | 0.581 | neutral | None | None | None | None | N |
T/Y | 0.2588 | likely_benign | 0.2056 | benign | -0.661 | Destabilizing | 0.991 | D | 0.579 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.